1-Chloroisoquinoline-4-carbonitrile: Handling & Lab Use Guide
1-Chloroisoquinoline-4-carbonitrile: Handling & Lab Use Guide
1-Chloroisoquinoline-4-carbonitrile is a bifunctional heteroaromatic building block featuring both a reactive C-1 chloro substituent and a C-4 nitrile group on the isoquinoline scaffold, making it a versatile electrophilic intermediate for medicinal chemistry and materials science research.
- CAS Number
- To be confirmed — see product datasheet (C185053)
- Molecular Formula
- C10H5ClN2
- Key Functional Groups
- Aryl chloride (C-1) and nitrile (C-4) on isoquinoline ring
- Primary Application
- Electrophilic building block for SNAr, cross-coupling, and nucleophilic addition reactions
- Recommended Storage
- Cool, dry, well-ventilated location; away from moisture and incompatible materials
- Product SKU
- C185053
Chemical Properties and Structure
1-Chloroisoquinoline-4-carbonitrile belongs to the class of chlorinated isoquinoline derivatives bearing a nitrile substituent. The isoquinoline ring system is an electron-deficient bicyclic aromatic heterocycle containing one nitrogen atom. The C-1 chloro group is activated toward nucleophilic aromatic substitution (SNAr) due to the electron-withdrawing effect of the ring nitrogen and the adjacent nitrile group at C-4. The nitrile moiety itself serves as a handle for further transformation: it can be hydrolyzed to carboxylic acids or amides, reduced to amines, converted to tetrazoles via cycloaddition with azides, or used directly in condensation reactions.
The compound is a solid at room temperature. Its solubility profile is typical of lipophilic heteroaromatic nitriles: it is generally soluble in polar aprotic solvents such as DMF, DMSO, and acetonitrile, and in chlorinated solvents such as DCM and chloroform, while exhibiting limited solubility in water.
Safe Handling and Storage Protocols
Personal Protective Equipment (PPE): Always wear appropriate PPE when handling 1-Chloroisoquinoline-4-carbonitrile. This includes chemical-resistant gloves (e.g., nitrile gloves), a laboratory coat, and safety glasses or a face shield. Because the compound contains a nitrile group and an aryl chloride, potential irritancy to skin, eyes, and the respiratory tract should be assumed until a full safety data sheet (SDS) assessment is performed.
Ventilation: Handle the compound in a well-functioning fume hood to minimize inhalation of dust or vapors.
Storage: Store in a tightly sealed container under cool (2–8 °C recommended for long-term stability), dry conditions, away from moisture, strong bases, strong oxidizers, and reducing agents. Keep away from incompatible nucleophiles that could react with the activated aryl chloride.
Waste Disposal: Dispose of waste in accordance with local, regional, and national environmental regulations. Do not pour down the drain without appropriate treatment. Consult the SDS for specific disposal guidance.
Spill Response: For small spills, sweep up solid material carefully to avoid dust generation, place in a sealed waste container, and decontaminate the area with an appropriate solvent followed by water rinse where safe.
Synthetic Applications and Reaction Protocols
1-Chloroisoquinoline-4-carbonitrile is primarily exploited as an electrophilic heteroaromatic building block in multi-step synthesis. The two orthogonal reactive sites allow sequential functionalization strategies.
Nucleophilic Aromatic Substitution (SNAr) at C-1: The activated C-1 chloride undergoes displacement with O-, N-, and S-nucleophiles (alcohols/alkoxides, amines, thiols) under mild to moderate conditions. Typical reaction conditions involve treatment with the nucleophile (1.0–2.0 equiv) in the presence of a base (e.g., K₂CO₃, Et₃N, or Cs₂CO₃) in a polar aprotic solvent (DMF or DMSO) at 60–100 °C. Reaction progress should be monitored by TLC or HPLC.
Transition-Metal-Catalyzed Cross-Coupling at C-1: The aryl chloride is amenable to palladium-catalyzed cross-coupling reactions such as Suzuki-Miyaura, Buchwald-Hartwig amination, and Negishi coupling. Standard palladium sources (Pd(PPh₃)₄, Pd₂(dba)₃/XPhos) and appropriate ligand/base systems should be selected based on coupling partner identity.
Nitrile Transformations at C-4: The nitrile group can be converted to: (1) a primary amide or carboxylic acid by hydrolysis under acidic or basic aqueous conditions; (2) an aminomethyl group by reduction with LiAlH₄ or BH₃·THF; (3) a tetrazole ring by [3+2] cycloaddition with sodium azide or trimethylsilyl azide, which is particularly valuable in medicinal chemistry as a carboxylic acid bioisostere; (4) an amidine by reaction with hydroxylamine to give an amidoxime intermediate followed by cyclization.
Recommended Solvent Systems: DMF, DMSO, MeCN, or THF are suitable for most transformations. Anhydrous conditions are recommended for reactions sensitive to moisture (e.g., LiAlH₄ reduction, organometallic coupling).
Quality Control and Analytical Characterization
Verification of compound identity and purity is essential prior to use in sensitive synthetic or biological assays. The following analytical techniques are recommended for 1-Chloroisoquinoline-4-carbonitrile:
¹H NMR Spectroscopy: The isoquinoline protons appear in the aromatic region (approximately δ 7.5–9.0 ppm). The absence of the C-1 proton (replaced by chlorine) and the C-4 position bearing the nitrile group define the characteristic pattern. Integration and multiplicity should match the expected number of aromatic protons.
¹³C NMR Spectroscopy: The nitrile carbon typically resonates near δ 115–120 ppm. The C-1 carbon bearing chlorine appears at a downfield position characteristic of halogenated aromatic carbons.
IR Spectroscopy: A strong, sharp nitrile stretching band is expected near 2220–2230 cm⁻¹, confirming the intact CN group.
Mass Spectrometry: The molecular ion should display the characteristic isotope pattern for one chlorine atom (M and M+2 in approximately 3:1 ratio). High-resolution mass spectrometry (HRMS) provides confirmation of the exact molecular formula.
HPLC Purity: Purity should be assessed by reversed-phase HPLC (C18 column, UV detection at 254 nm or 280 nm). Aladdin Scientific provides lot-specific certificates of analysis (CoA) for product C185053; always consult the CoA for purity and melting point data.
Regulatory Compliance and Documentation
Safety Data Sheet (SDS): Always obtain and read the current SDS for 1-Chloroisoquinoline-4-carbonitrile (C185053) from Aladdin Scientific before use. The SDS contains authoritative information on hazard classification, first aid measures, firefighting procedures, exposure controls, and disposal requirements.
GHS Classification: Classification of this compound under the Globally Harmonized System (GHS) should be confirmed from the official SDS, as detailed hazard data for this specific compound may require experimental determination.
Laboratory Record-Keeping: Maintain accurate records of quantities purchased, used, and disposed of, including lot numbers from the CoA. This is essential for reproducibility, compliance audits, and safety incident investigations.
Import/Export Regulations: Researchers should verify whether this compound is subject to export control regulations or requires special permits in their jurisdiction before ordering internationally.
Research Use Only: This product is supplied for research use only and is not intended for diagnostic, therapeutic, or food/feed applications.
Frequently asked questions
What solvents are recommended for dissolving 1-Chloroisoquinoline-4-carbonitrile?
1-Chloroisoquinoline-4-carbonitrile is generally soluble in polar aprotic solvents such as DMSO, DMF, and acetonitrile, as well as chlorinated solvents like dichloromethane and chloroform. Aqueous solubility is expected to be low due to the lipophilic heteroaromatic scaffold. It is advisable to prepare a concentrated stock solution in DMSO and dilute as required.
Can the C-1 chloro group be selectively functionalized in the presence of the C-4 nitrile?
Yes. The C-1 aryl chloride is generally more reactive than the nitrile group under SNAr or palladium-catalyzed cross-coupling conditions. Careful selection of reaction conditions—nucleophile type, temperature, catalyst, and solvent—allows selective displacement or coupling at C-1 while leaving the nitrile intact for subsequent transformations. The nitrile can then be manipulated independently in a subsequent synthetic step.
How should 1-Chloroisoquinoline-4-carbonitrile be stored to maintain long-term stability?
The compound should be stored in a tightly sealed container under cool, dry conditions, ideally at 2–8 °C for long-term storage, protected from light and moisture. Exposure to moisture may promote hydrolysis of the nitrile group or adventitious reactions of the aryl chloride. Always re-seal the container promptly after use and allow cold samples to equilibrate to room temperature before opening to avoid condensation.
Is 1-Chloroisoquinoline-4-carbonitrile suitable for use as a pharmaceutical building block?
Yes, this compound is well-suited as a pharmaceutical building block. Isoquinoline derivatives are prevalent in bioactive natural products and drug candidates, and the dual functionalization at C-1 (chloro) and C-4 (nitrile) enables rapid diversification of the scaffold through established medicinal chemistry transformations. The nitrile can also be converted to a tetrazole, a well-known carboxylic acid bioisostere, adding further utility in drug design.
Where can I obtain the Certificate of Analysis (CoA) and Safety Data Sheet (SDS) for C185053?
The Certificate of Analysis and Safety Data Sheet for 1-Chloroisoquinoline-4-carbonitrile (SKU: C185053) are available directly from the Aladdin Scientific website product page. Enter the product SKU or lot number in the documentation search to download the most current documents for your specific batch.
References
- Clayden, J.; Greeves, N.; Warren, S. Organic Chemistry, 2nd ed.; Oxford University Press: Oxford, 2012. (General reference for SNAr reactions and nitrile chemistry.)
- Joule, J. A.; Mills, K. Heterocyclic Chemistry, 5th ed.; Wiley-Blackwell: Oxford, 2010. (Isoquinoline chemistry and functionalization strategies.)
- Kolb, H. C.; Finn, M. G.; Sharpless, K. B. Click Chemistry: Diverse Chemical Function from a Few Good Reactions. Angew. Chem. Int. Ed. 2001, 40, 2004–2021. (Background on azide-nitrile cycloaddition and tetrazole formation.) doi:10.1002/1521-3773(20010601)40:11<2004::AID-ANIE2004>3.0.CO;2-5
- Aladdin Scientific. Product page for 1-Chloroisoquinoline-4-carbonitrile, SKU C185053. https://www.aladdin-e.com (accessed 2025).
Products are supplied for research and development use only. Not for use in humans, animals, diagnosis, or therapy.
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