(2-Chloro-1,3-thiazol-5-yl)methanol: Properties & Lab Guide
(2-Chloro-1,3-thiazol-5-yl)methanol: Properties & Lab Guide
(2-Chloro-1,3-thiazol-5-yl)methanol is a versatile chlorothiazole-bearing primary alcohol that serves as a valuable building block in medicinal chemistry and heterocyclic synthesis, enabling downstream functionalization at both the reactive C-2 chloro position and the hydroxymethyl group.
- Chemical Name
- (2-Chloro-1,3-thiazol-5-yl)methanol
- Molecular Formula
- C4H4ClNOS
- Molecular Weight
- 149.60 g/mol
- Functional Groups
- Primary alcohol (–CH2OH) and C-2 chloro substituent on 1,3-thiazole ring
- Key Reactivity
- Nucleophilic aromatic substitution at C-2 chloro position; oxidation, esterification, or etherification of the hydroxymethyl group
- Recommended Storage
- Cool, dry, well-ventilated area; store away from moisture and incompatible materials
- Aladdin SKU
- C482066
Physicochemical Properties and Structure
(2-Chloro-1,3-thiazol-5-yl)methanol (molecular formula C4H4ClNOS; MW 149.60 g/mol) is a five-membered heterocyclic compound featuring a 1,3-thiazole ring substituted at the 2-position with a chlorine atom and at the 5-position with a hydroxymethyl (–CH2OH) group.
The thiazole ring system contains both a sulfur and a nitrogen atom, conferring aromatic stability and a degree of electron deficiency at C-2 that makes the C–Cl bond amenable to nucleophilic displacement. The primary alcohol at C-5 is a versatile handle for further chemical elaboration. The compound is typically isolated as a pale solid or low-melting material; exact melting point and solubility data should be confirmed against the certificate of analysis supplied with each lot.
Common organic solvents (e.g., ethanol, DMSO, DCM, EtOAc) are generally suitable for dissolution; aqueous solubility is limited due to the lipophilic thiazole and chloro substituents.
Synthetic Utility and Applications
(2-Chloro-1,3-thiazol-5-yl)methanol is widely employed as a bifunctional building block in medicinal chemistry and agrochemical research. Its two distinct reactive sites allow sequential or orthogonal functionalization strategies:
- C-2 Chloro substitution: The electron-deficient C-2 position undergoes nucleophilic aromatic substitution (SNAr) with amines, thiols, and alkoxides, enabling the preparation of 2-amino-, 2-thio-, and 2-alkoxy-thiazole derivatives relevant to pharmaceutical lead optimization.
- Hydroxymethyl transformations: The primary alcohol can be oxidized to the corresponding aldehyde or carboxylic acid, converted to a leaving group (mesylate, tosylate, halide) for nucleophilic substitution, esterified, etherified, or subjected to Mitsunobu coupling. These transformations expand the chemical space accessible from this single starting material.
- Cross-coupling: Following conversion of the alcohol to an appropriate electrophile, palladium-catalyzed cross-coupling reactions (e.g., Suzuki, Buchwald–Hartwig) at C-2 are feasible for introducing aryl or heteroaryl groups.
The compound is particularly valuable in the synthesis of thiazole-containing pharmacophores associated with kinase inhibition, antimicrobial activity, and other biological targets.
Handling, Safety, and Storage Guidelines
Always consult the Safety Data Sheet (SDS) provided by Aladdin Scientific before working with (2-Chloro-1,3-thiazol-5-yl)methanol. While detailed hazard classification should be verified in the current SDS, general precautions for chloro-heterocyclic compounds apply:
- Personal Protective Equipment (PPE): Wear appropriate chemical-resistant gloves, safety goggles, and a laboratory coat. Work in a well-ventilated fume hood to minimize inhalation exposure.
- Storage: Store in a tightly sealed container in a cool, dry, well-ventilated area, away from moisture, oxidizers, and strong bases. Refrigerated storage (2–8 °C) may be appropriate to preserve stability; confirm with the product SDS and certificate of analysis.
- Stability: The compound should be kept away from prolonged exposure to light and moisture. Inert atmosphere (N2 or Ar) blanketing is advisable when handling hygroscopic or air-sensitive lots.
- Waste Disposal: Dispose of residues in accordance with local, national, and institutional regulations for halogenated organic waste.
All safety information provided here is general guidance only; always defer to the current lot-specific SDS for authoritative hazard data.
Quality, Purity, and Procurement Considerations
For research applications, purity is a critical parameter that directly affects experimental reproducibility. When procuring (2-Chloro-1,3-thiazol-5-yl)methanol (Aladdin Scientific SKU: C482066), researchers should consider the following:
- Certificate of Analysis (CoA): Request the lot-specific CoA to verify purity (typically assessed by HPLC or GC), melting point, NMR identity confirmation, and water content.
- Purity grades: For routine synthesis screening, standard reagent-grade material is generally sufficient. For quantitative biological assays or reference standard applications, higher purity grades should be specified.
- Packaging: Order in quantities appropriate to anticipated usage to minimize repeated freeze-thaw or open-close cycles that can compromise product integrity.
- Verification on receipt: Upon receipt, confirm that the container is intact, properly labeled, and that the physical appearance matches the description in the CoA. Any discrepancies should be reported to Aladdin Scientific customer service promptly.
Frequently asked questions
What solvents are suitable for dissolving (2-Chloro-1,3-thiazol-5-yl)methanol?
Common organic solvents such as DMSO, ethanol, dichloromethane, and ethyl acetate are generally suitable. Aqueous solubility is limited due to the lipophilic thiazole ring and chloro substituent. Always test solubility on a small scale before preparing large stock solutions, and consult the product CoA for lot-specific data.
How should (2-Chloro-1,3-thiazol-5-yl)methanol be stored to maintain stability?
Store the compound in a tightly sealed container in a cool, dry, and well-ventilated area away from moisture, light, and incompatible materials such as strong oxidizers and bases. Refrigerated storage at 2–8 °C may be recommended; confirm exact conditions with the lot-specific SDS and CoA provided by Aladdin Scientific.
What are the main chemical transformations possible with this compound?
(2-Chloro-1,3-thiazol-5-yl)methanol offers two principal reactive sites: the C-2 chloro group, which undergoes nucleophilic aromatic substitution with amines, thiols, and alkoxides; and the hydroxymethyl group, which can be oxidized, esterified, etherified, converted to a leaving group, or used in Mitsunobu reactions. These complementary reactivities make it a versatile intermediate for heterocyclic library synthesis.
How do I verify the purity of the received material?
Request the lot-specific Certificate of Analysis (CoA) from Aladdin Scientific, which reports purity determined by HPLC or GC, NMR identity data, and physical constants such as melting point. For critical applications, in-house verification by HPLC, NMR spectroscopy, or elemental analysis is recommended prior to use.
Is (2-Chloro-1,3-thiazol-5-yl)methanol suitable for biological assays directly?
This compound is primarily used as a synthetic intermediate rather than as a final active compound. If direct biological testing is intended, researchers should verify purity to the highest available grade, assess solubility in assay-compatible media (e.g., aqueous buffer with low DMSO content), and consult relevant safety data before proceeding.
References
- Aladdin Scientific Product Page: (2-Chloro-1,3-thiazol-5-yl)methanol, SKU C482066. Aladdin Scientific Corp.
- March, J. Advanced Organic Chemistry: Reactions, Mechanisms, and Structure. 5th ed. Wiley-Interscience. General reference for nucleophilic aromatic substitution and alcohol transformations.
- Kappe, C. O.; Stadler, A.; Dallinger, D. Microwaves in Organic and Medicinal Chemistry. Wiley-VCH. Reference for heterocyclic building block utility in medicinal chemistry.
Products are supplied for research and development use only. Not for use in humans, animals, diagnosis, or therapy.
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