2-Chloro-1H,4H-pyrrolo[2,1-f][1,2,4]triazin-4-one: Handling & Use Guide
2-Chloro-1H,4H-pyrrolo[2,1-f][1,2,4]triazin-4-one: Handling & Use Guide
2-chloro-1H,4H-pyrrolo[2,1-f][1,2,4]triazin-4-one is a bicyclic heterocyclic building block featuring a reactive C-2 chloro substituent on a pyrrolo[2,1-f][1,2,4]triazin-4-one core, making it a versatile intermediate for the synthesis of nucleoside analogues, antiviral agents, and kinase-targeting small molecules.
- IUPAC Name
- 2-chloro-1H,4H-pyrrolo[2,1-f][1,2,4]triazin-4-one
- SKU / Catalogue Number
- C174617
- Core Scaffold
- Pyrrolo[2,1-f][1,2,4]triazin-4-one (bicyclic: fused pyrrole and 1,2,4-triazinone)
- Key Reactive Site
- C-2 chloro group, susceptible to nucleophilic aromatic substitution (SNAr) and cross-coupling reactions
- Primary Applications
- Synthesis of antiviral nucleoside analogues, kinase inhibitor scaffolds, and functionalised triazinone derivatives
- Recommended Storage
- Cool, dry, well-ventilated location; sealed container away from moisture and light
Compound Overview and Structural Features
2-Chloro-1H,4H-pyrrolo[2,1-f][1,2,4]triazin-4-one (Aladdin SKU: C174617) belongs to the pyrrolo[2,1-f][1,2,4]triazine family of fused bicyclic nitrogen heterocycles. The scaffold consists of a five-membered pyrrole ring fused to a six-membered 1,2,4-triazin-4-one ring, creating an electron-deficient aromatic system. The lactam carbonyl at position 4 and the chlorine substituent at position 2 define the compound's key physicochemical and reactivity profile.
The electron-withdrawing nature of the triazinone ring activates the C-2 chlorine toward nucleophilic aromatic substitution (SNAr), enabling straightforward displacement by amines, alcohols, thiols, and other nucleophiles under mild conditions. The compound can also participate in transition-metal-catalysed cross-coupling reactions (e.g., Suzuki, Buchwald–Hartwig) at the C-2 position, providing access to a broad library of C-N and C-C bonded analogues.
This scaffold closely mimics the purine ring system found in naturally occurring nucleosides, which underpins its widespread use as a synthetic starting material in medicinal chemistry programmes targeting viral polymerases and protein kinases.
Handling, Safety and Storage
Personal Protective Equipment (PPE): Researchers should wear appropriate PPE when handling this compound, including chemical-resistant gloves (nitrile recommended), a laboratory coat, and safety goggles. For weighing or any operation that may generate dust or aerosol, work inside a fume hood or use a dust mask rated for fine chemical particles.
Storage: Store the compound in a tightly sealed container in a cool (typically 2–8 °C or as specified on the Certificate of Analysis), dry, and well-ventilated area, protected from moisture and light. Prolonged exposure to humidity may promote hydrolysis of the C-Cl bond or ring-opening side reactions. Always check the Certificate of Analysis (CoA) supplied with each lot for lot-specific storage conditions and retest dates.
Waste Disposal: Dispose of waste material in accordance with local, regional, and national regulations governing halogenated organic compounds. Do not dispose of down the drain. Consult your institution's Environmental Health and Safety (EHS) office for approved disposal routes.
First Aid: In case of skin or eye contact, flush immediately with copious water for at least 15 minutes and seek medical advice. If inhaled, move to fresh air. Refer to the Safety Data Sheet (SDS) for full hazard and first-aid information.
Synthetic Applications and Reaction Protocols
Nucleophilic Aromatic Substitution (SNAr): The C-2 chloro group is readily displaced by primary and secondary amines in polar aprotic solvents such as DMF, DMSO, or NMP at temperatures ranging from room temperature to 100 °C, depending on nucleophile reactivity. Typical bases used to neutralise the generated HCl include triethylamine, DIPEA, or K₂CO₃. Reaction progress can be monitored by TLC or HPLC.
Palladium-Catalysed Cross-Coupling: The C-2 chloride is a competent electrophile in Suzuki–Miyaura (with boronic acids/esters), Buchwald–Hartwig (C-N coupling with amines), and related Pd-catalysed reactions. Standard Pd catalysts (e.g., Pd(PPh₃)₄, Pd₂(dba)₃ with suitable ligand) and inorganic bases in aqueous/organic mixed solvents are applicable. Optimisation of catalyst loading, ligand, base, and temperature is recommended for each specific coupling partner.
N-1 Functionalisation: The NH at position 1 can be protected (e.g., as Boc, SEM, or PMB derivatives) prior to C-2 manipulation to avoid competitive N-alkylation or interference in subsequent steps. Selective N-protection should be confirmed by NMR.
Quality Check Before Use: Verify compound identity and purity by ¹H NMR, LC-MS, or HPLC against the CoA before commencing synthesis. This is especially important when the compound has been stored for extended periods or when working with moisture-sensitive downstream steps.
Quality, Purity and Analytical Characterisation
Each lot of 2-chloro-1H,4H-pyrrolo[2,1-f][1,2,4]triazin-4-one (C174617) supplied by Aladdin Scientific is accompanied by a Certificate of Analysis (CoA) documenting lot-specific purity data. Researchers should request and review the CoA prior to use.
Recommended Analytical Methods:
- ¹H and ¹³C NMR: Primary tool for structural confirmation. Key signals include the lactam NH (broad, exchangeable), aromatic/vinyl CH protons of the pyrrole ring, and absence of signals inconsistent with the expected structure.
- LC-MS: Used to confirm molecular weight ([M+H]⁺ or [M-H]⁻ depending on ionisation mode) and assess purity by UV trace at 254 nm or 214 nm. The molecular formula is C₆H₄ClN₃O.
- HPLC: Reverse-phase HPLC (C18 column, acetonitrile/water gradient) provides a quantitative purity assessment. A purity of ≥95% (as measured by peak area normalisation) is typically expected for synthetic-grade material.
- Melting Point: A sharp, reproducible melting point consistent with published values or the CoA supports compound integrity.
If analytical data diverge significantly from the CoA, contact Aladdin Scientific customer support with your lot number for technical assistance.
Ordering, Availability and Technical Support
Ordering: 2-Chloro-1H,4H-pyrrolo[2,1-f][1,2,4]triazin-4-one is available from Aladdin Scientific under catalogue number C174617. Orders can be placed through the Aladdin Scientific website, by email, or through your local authorised distributor. Quantity availability and lead times may vary; contact customer service for bulk or custom quantity enquiries.
Certificate of Analysis and SDS: The CoA and Safety Data Sheet (SDS) for each lot are available on the Aladdin Scientific website by entering the lot number, or by contacting customer support directly. Always use the lot-specific CoA rather than a generic document.
Technical Support: For application-specific questions, custom synthesis enquiries, or analytical data interpretation, contact the Aladdin Scientific technical support team. Provide the catalogue number (C174617), lot number, and a description of your application to receive the most relevant assistance.
Returns and Quality Issues: If the received material does not meet specifications stated in the CoA, Aladdin Scientific's returns and refunds policy applies. Please refer to the website or contact customer service within the applicable notification window.
Frequently asked questions
What solvents are suitable for dissolving 2-chloro-1H,4H-pyrrolo[2,1-f][1,2,4]triazin-4-one?
The compound is generally soluble in polar aprotic solvents such as DMSO, DMF, and NMP. Solubility in common organic solvents such as ethyl acetate, dichloromethane, and acetonitrile is moderate and should be verified experimentally. Avoid prolonged storage of solutions in protic solvents or aqueous media, as the C-2 chloride may be susceptible to hydrolysis.
Can the C-2 chloro group be selectively modified without affecting the lactam NH at position 1?
Yes, selective C-2 modification via SNAr or Pd-catalysed cross-coupling is achievable without prior N-protection in many cases, particularly when using less reactive or bulky nucleophiles. However, for reactions requiring strongly basic or alkylating conditions, it is advisable to protect the N-1 position (e.g., as a Boc or SEM carbamate) beforehand to prevent N-alkylation side products. Confirm selectivity by NMR analysis of crude and purified material.
How should I confirm the purity of C174617 upon receipt?
Upon receipt, check the lot-specific Certificate of Analysis (CoA) provided with the shipment for purity data. For additional in-house verification, perform ¹H NMR in DMSO-d₆ or CDCl₃ and compare with the expected spectral pattern, and run an LC-MS to confirm the molecular ion and assess purity by UV trace. HPLC purity (peak area normalisation at 254 nm) should be ≥95% for synthetic-grade material; contact Aladdin Scientific technical support if results fall outside specification.
What are the main medicinal chemistry applications of the pyrrolo[2,1-f][1,2,4]triazinone scaffold?
The pyrrolo[2,1-f][1,2,4]triazinone scaffold is a recognised bioisostere of the purine system and has been widely explored in the synthesis of nucleoside analogues with antiviral activity (e.g., targeting RNA-dependent RNA polymerases) and in the design of small-molecule kinase inhibitors. The C-2 chloro derivative serves as a key intermediate for introducing diverse substituents that modulate potency, selectivity, and pharmacokinetic properties in drug discovery programmes.
References
- Aladdin Scientific Product Certificate of Analysis, 2-Chloro-1H,4H-pyrrolo[2,1-f][1,2,4]triazin-4-one, SKU C174617. Aladdin Scientific Corp.
- March, J. Advanced Organic Chemistry: Reactions, Mechanisms, and Structure. Wiley-Interscience. (General reference for nucleophilic aromatic substitution and cross-coupling reactions of halogenated heterocycles.)
- Meanwell, N. A. Synopsis of some recent tactical application of bioisosteres in drug design. Journal of Medicinal Chemistry. (General reference for pyrrolo[2,1-f][1,2,4]triazine scaffold in medicinal chemistry; specific volume/page not confirmed from source material.)
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