6-Boc-Tetrahydropyrazolopyridine-3-carboxylic Acid: FAQs
6-Boc-Tetrahydropyrazolopyridine-3-carboxylic Acid: FAQs
6-Boc-1,4,5,7-tetrahydropyrazolo[3,4-c]pyridine-3-carboxylic acid is a Boc-protected bicyclic heterocyclic building block featuring both a free carboxylic acid and a piperidine nitrogen protected with a tert-butoxycarbonyl group, making it a versatile scaffold for medicinal chemistry and drug discovery applications.
- CAS Number
- Refer to product datasheet (B195180); verify at time of ordering
- Molecular Formula
- C12H17N3O4 (to be confirmed against the official certificate of analysis)
- Functional Groups
- Boc-protected secondary amine; free carboxylic acid; pyrazole ring
- Recommended Storage
- Store in a cool, dry place away from light; confirm exact conditions on the product datasheet
- Primary Applications
- Medicinal chemistry synthesis, fragment-based drug discovery, peptidomimetic and heterocycle coupling reactions
- Protective Group
- tert-Butoxycarbonyl (Boc) on the piperidine-ring nitrogen, removable under mild acidic conditions (e.g., TFA/DCM)
What Is 6-Boc-1,4,5,7-Tetrahydropyrazolo[3,4-c]pyridine-3-carboxylic Acid?
6-Boc-1,4,5,7-tetrahydropyrazolo[3,4-c]pyridine-3-carboxylic acid (Aladdin SKU: B195180) is a bicyclic heterocyclic compound that fuses a pyrazole ring with a partially saturated piperidine ring. The nitrogen at position 6 of the piperidine portion is protected with a tert-butoxycarbonyl (Boc) group, while position 3 of the pyrazole carries a free carboxylic acid.
This dual-functionality—an acid handle for amide coupling and a Boc-protected amine for selective deprotection—makes the compound an attractive intermediate in the synthesis of pharmacologically relevant molecules. The fused ring system provides a rigid, three-dimensional scaffold that can improve binding selectivity in drug candidates compared to purely linear or monocyclic analogs.
Chemical Properties and Structural Features
The compound contains three key structural elements:
- Pyrazole ring (positions 1–3): A five-membered aromatic ring containing two adjacent nitrogen atoms. The C-3 carboxylic acid is available for further functionalization, including standard carbodiimide (EDC/DCC) or HATU-mediated amide bond formation.
- Partially saturated piperidine ring: The six-membered ring (positions 4–7) is saturated at positions 4, 5, and 7, conferring sp³ character and improved aqueous solubility compared to fully aromatic analogs.
- Boc protecting group: The N-Boc group on the piperidine nitrogen is stable under basic and neutral aqueous conditions but is readily cleaved under mildly acidic conditions (e.g., 20–50% trifluoroacetic acid in dichloromethane, or 4 M HCl in dioxane), releasing the free amine for further elaboration.
The presence of multiple nitrogen atoms in the scaffold makes this compound suitable for coordination chemistry and metal-chelating applications in addition to organic synthesis.
Handling, Storage, and Safety Considerations
Storage: Store the compound in a tightly sealed container in a cool, dry location away from direct light and moisture. Confirm the recommended temperature range (e.g., room temperature or 2–8 °C) on the specific lot's certificate of analysis (CoA) or product datasheet provided with the shipment.
Handling: Use standard personal protective equipment (PPE): laboratory coat, chemical-resistant gloves, and safety glasses. Work in a well-ventilated fume hood when weighing or dissolving the material. Although specific hazard classifications for this compound should be verified against the Safety Data Sheet (SDS), general precautions for fine organic powders apply, including avoiding inhalation of dust.
Solubility: The compound is expected to dissolve in polar aprotic solvents such as DMSO, DMF, and acetonitrile. Limited solubility may be observed in non-polar solvents. Verify exact solubility data on the product datasheet before use.
Stability: The Boc group is stable under neutral and basic conditions but will hydrolyze under acidic conditions. Avoid prolonged exposure to protic acids, strong Lewis acids, or humid environments that may trigger premature deprotection.
Applications in Medicinal Chemistry and Synthesis
The pyrazolopyridine scaffold found in this compound is a privileged structure in medicinal chemistry. Fused bicyclic systems incorporating pyrazole are found in numerous bioactive compounds and approved drugs, making this type of building block valuable for lead generation and library synthesis.
Typical synthetic applications include:
- Amide coupling: The C-3 carboxylic acid can be activated and coupled to primary or secondary amines using standard coupling reagents (e.g., EDC·HCl, HATU, DCC) to generate amide analogs for structure–activity relationship (SAR) studies.
- Boc deprotection and further functionalization: Removal of the Boc group under acidic conditions liberates the secondary amine, which can then be alkylated, acylated, sulfonylated, or reductively aminated to introduce structural diversity.
- Fragment-based drug discovery (FBDD): The compact, rigid bicyclic core is well-suited as a fragment hit or fragment-to-lead starting point.
- Peptidomimetic synthesis: The scaffold can serve as a non-natural amino acid surrogate to constrain peptide conformation.
Ordering, Quality, and Technical Support
SKU: B195180 — 6-Boc-1,4,5,7-tetrahydropyrazolo[3,4-c]pyridine-3-carboxylic acid is available exclusively under this SKU at Aladdin Scientific.
Purity and Quality: Each lot is supplied with a certificate of analysis (CoA) that specifies purity (typically assessed by HPLC or NMR), appearance, and other quality parameters. Customers are encouraged to request the CoA before or upon receipt of the product.
Custom Quantities: If the standard pack size does not meet your project needs, contact Aladdin's customer service team to discuss custom quantities, bulk pricing, or custom synthesis options.
Technical Questions: For questions regarding specific reaction conditions, compatibility with downstream assays, or analytical characterization, please reach out to Aladdin's technical support team via the website or email. Our scientific team is available to assist with application-specific guidance.
Shipping: Products are shipped in accordance with applicable regulations for research chemicals. Confirm shipping conditions (ambient, cold chain) with customer service at the time of ordering to ensure compound integrity upon delivery.
Frequently asked questions
What is the CAS number and molecular weight of 6-Boc-1,4,5,7-tetrahydropyrazolo[3,4-c]pyridine-3-carboxylic acid?
The exact CAS number and molecular weight should be confirmed on the product datasheet or certificate of analysis for SKU B195180, as these values are lot-specific and subject to verification. Please contact Aladdin Scientific or refer to the product page for the most current and accurate information.
How should I deprotect the Boc group on this compound?
The Boc group on the piperidine nitrogen can be removed under standard mild acidic conditions. Common protocols include treatment with 20–50% trifluoroacetic acid (TFA) in dichloromethane (DCM) for 30–60 minutes at room temperature, or with 4 M HCl in 1,4-dioxane. After deprotection, the resulting amine salt can be neutralized with a base such as triethylamine or K₂CO₃ prior to further reactions. Exact conditions may need to be optimized for your specific downstream application.
What solvents are suitable for dissolving 6-Boc-1,4,5,7-tetrahydropyrazolo[3,4-c]pyridine-3-carboxylic acid?
This compound is expected to dissolve well in polar aprotic solvents such as DMSO, DMF, and acetonitrile. Solubility in water may be limited due to the lipophilic Boc group, though the carboxylic acid may aid dissolution in slightly basic aqueous solutions. Always verify solubility experimentally with your specific lot using the CoA as a reference, and consult the Aladdin product datasheet for confirmed solubility data.
Is this compound suitable for amide coupling reactions, and what reagents are recommended?
Yes, the free carboxylic acid at position 3 of the pyrazole ring makes this compound directly amenable to standard amide coupling protocols. Widely used coupling reagents such as EDC·HCl (with or without HOBt), HATU, or DCC are appropriate choices. The reaction is typically carried out in DMF or DCM in the presence of a base such as DIPEA or triethylamine. Reaction conditions should be optimized depending on the amine coupling partner and the desired scale.
How should I store this compound to maintain its stability?
Store 6-Boc-1,4,5,7-tetrahydropyrazolo[3,4-c]pyridine-3-carboxylic acid in a tightly sealed container, in a cool and dry location, protected from light and moisture. Avoid exposure to acidic environments, which can cause premature Boc deprotection. Confirm the recommended storage temperature (ambient or refrigerated) by consulting the certificate of analysis or contacting Aladdin Scientific's technical support.
Can I request a certificate of analysis or safety data sheet for SKU B195180?
Yes. Certificates of analysis (CoA) and Safety Data Sheets (SDS) for SKU B195180 are available upon request from Aladdin Scientific. You can contact customer service directly through the Aladdin website or by email, providing your order number or lot number for a lot-specific CoA. SDS documents are available prior to purchase to support risk assessment and compliance requirements.
References
- General reference: Greene, T. W.; Wuts, P. G. M. Protective Groups in Organic Synthesis, 4th ed.; Wiley-Interscience: New York, 2007. (Standard reference for Boc protecting group chemistry.)
- General reference: Roughley, S. D.; Jordan, A. M. The medicinal chemist's toolbox: an analysis of reactions used in the pursuit of drug candidates. J. Med. Chem. 2011, 54, 3451–3479. (Background on amide coupling and building block use in medicinal chemistry.) doi:10.1021/jm200187y
- Aladdin Scientific product datasheet for SKU B195180: 6-Boc-1,4,5,7-tetrahydropyrazolo[3,4-c]pyridine-3-carboxylic acid. (Consult for confirmed CAS, MW, purity, and storage conditions.)
Products are supplied for research and development use only. Not for use in humans, animals, diagnosis, or therapy.
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