6-Chloro-2-ethoxypyrimidin-4-amine: Handling & Lab Guidelines
6-Chloro-2-ethoxypyrimidin-4-amine: Handling & Lab Guidelines
6-Chloro-2-ethoxypyrimidin-4-amine is a versatile halogenated aminopyrimidine building block widely employed in medicinal chemistry and heterocyclic synthesis as a reactive intermediate for the construction of pharmacologically relevant pyrimidine-based scaffolds.
- CAS Number
- 7749-56-6
- Molecular Formula
- C₆H₈ClN₃O
- Molecular Weight
- 173.60 g/mol
- SKU / Product Code
- C192759
- Recommended Storage
- Store in a cool, dry, well-ventilated area away from light; seal tightly after use
- Key Functional Groups
- Aryl chloride, ethoxy group, primary amine
- Primary Application
- Synthetic intermediate for pyrimidine-based drug candidates and agrochemicals
Chemical Identity and Properties
6-Chloro-2-ethoxypyrimidin-4-amine (SKU: C192759) is a substituted pyrimidine bearing three key substituents: a chloro group at the 6-position, an ethoxy group at the 2-position, and an amino group at the 4-position. Its molecular formula is C₆H₈ClN₃O with a molecular weight of approximately 173.60 g/mol.
The compound is a solid at room temperature and is typically pale yellow to off-white in appearance. The simultaneous presence of a nucleophilic primary amine and an electrophilic aryl chloride on the pyrimidine ring makes it a bifunctional building block capable of participating in both nucleophilic substitution and coupling reactions. The ethoxy group at the 2-position can also serve as a leaving group under appropriate conditions, further expanding its synthetic utility.
Solubility: the compound is generally soluble in common organic solvents such as dimethyl sulfoxide (DMSO), dimethylformamide (DMF), and dichloromethane (DCM). Aqueous solubility is limited at neutral pH. Researchers should verify exact solubility experimentally under their specific assay conditions.
Storage, Handling and Safety Guidelines
Storage: Store 6-Chloro-2-ethoxypyrimidin-4-amine in a tightly sealed container in a cool (2–8 °C or as specified on the certificate of analysis), dry, and well-ventilated location, protected from light and moisture. Prolonged exposure to air, humidity, or elevated temperatures may compromise purity and reactivity.
Personal Protective Equipment (PPE): When handling this compound, wear appropriate PPE including nitrile gloves, a laboratory coat, and safety goggles. Work in a fume hood or well-ventilated area to avoid inhalation of dust or aerosols. Avoid contact with skin, eyes, and mucous membranes.
Waste Disposal: Dispose of waste in accordance with local, regional, and national regulations governing hazardous chemical waste. Do not pour into drains or the environment. Consult the Safety Data Sheet (SDS) for full hazard classification and emergency response information before use.
Stability: Under recommended storage conditions, the compound is expected to be stable. However, the aryl chloride moiety may be susceptible to hydrolysis under strongly acidic or basic aqueous conditions. Prepare solutions fresh when possible and store under inert atmosphere if long-term stability is required.
Synthetic Applications and Reaction Protocols
6-Chloro-2-ethoxypyrimidin-4-amine is a privileged heterocyclic intermediate in medicinal chemistry and process chemistry. Its reactivity profile enables several key synthetic transformations:
- Nucleophilic Aromatic Substitution (SNAr): The C-6 chloro substituent is activated toward SNAr reactions with amines, thiols, and alkoxides. Reactions are typically conducted in polar aprotic solvents (e.g., DMF, NMP, DMSO) at elevated temperatures (60–120 °C) in the presence of a suitable base (e.g., K₂CO₃, Et₃N, DIPEA). This allows selective introduction of diverse nucleophiles at the 6-position to furnish 2-ethoxy-6-substituted-pyrimidin-4-amines.
- Transition-Metal-Catalyzed Cross-Coupling: The aryl chloride can participate in palladium-catalyzed cross-coupling reactions, including Suzuki–Miyaura, Buchwald–Hartwig amination, and Negishi couplings, enabling access to biaryl and diarylamino pyrimidine derivatives relevant to kinase inhibitor programs.
- Ethoxy Group Displacement: Under harsh acidic or nucleophilic conditions, the 2-ethoxy group can be displaced to generate 2-substituted pyrimidine analogs, providing an additional handle for library synthesis.
- Acylation/Sulfonylation of the 4-Amino Group: The primary amine at the 4-position can be selectively acylated or sulfonylated, offering routes to amide and sulfonamide derivatives with modulated physicochemical properties.
Researchers should optimize reaction conditions (catalyst loading, base, solvent, temperature, and time) for their specific substrates. Always conduct small-scale optimization reactions before scaling up.
Quality, Purity and Analytical Characterization
Aladdin Scientific supplies 6-Chloro-2-ethoxypyrimidin-4-amine (C192759) with a purity specification confirmed by high-performance liquid chromatography (HPLC). A Certificate of Analysis (CoA) accompanies each lot and should be consulted to confirm the purity grade, lot-specific data, and recommended storage conditions before use.
Recommended Analytical Methods for In-House Verification:
- HPLC-UV: Use a C18 reverse-phase column with an acetonitrile/water gradient to assess purity. Monitor at 254 nm or the compound's absorption maximum.
- ¹H NMR and ¹³C NMR: Confirm structural identity in deuterated solvents such as CDCl₃ or DMSO-d₆. Key signals include the aromatic/vinyl proton on the pyrimidine ring, NH₂ protons, and the OCH₂CH₃ ethoxy resonances.
- LC-MS: Verify molecular ion [M+H]⁺ consistent with MW = 173.60 g/mol.
- Melting Point: Determine and compare against literature values as an additional purity check.
If the compound has been stored for an extended period or shows visible changes (discoloration, clumping), re-characterize before use in critical experiments. Contact Aladdin Scientific technical support for batch-specific documentation or purity queries.
Regulatory and Procurement Information
Product Availability: 6-Chloro-2-ethoxypyrimidin-4-amine is available from Aladdin Scientific under SKU C192759. Please visit the product page or contact your regional Aladdin representative for current stock levels, available quantities, and pricing.
Intended Use: This product is supplied for research and development purposes only. It is not intended for use in diagnostic procedures, drug manufacturing, food, household, or cosmetic applications without appropriate regulatory authorization.
Export Controls and Regulatory Compliance: Customers are responsible for ensuring compliance with all applicable local, national, and international regulations governing the purchase, import, export, and use of this chemical. Verify whether import licenses or other documentation are required in your jurisdiction prior to ordering.
Returns and Quality Issues: If the product does not meet the stated specification, contact Aladdin Scientific customer service within the applicable return window with your order details and CoA. Refer to Aladdin's Returns and Refunds Policy for full terms.
SDS Availability: The Safety Data Sheet (SDS) for C192759 is available upon request and should be reviewed by all personnel handling this compound prior to use.
Frequently asked questions
What is the recommended solvent for dissolving 6-Chloro-2-ethoxypyrimidin-4-amine?
6-Chloro-2-ethoxypyrimidin-4-amine is generally soluble in polar aprotic organic solvents such as DMSO, DMF, and DCM. Aqueous solubility at neutral pH is limited. We recommend preparing a concentrated stock solution in DMSO and diluting as needed; verify solubility experimentally for your specific application.
How should 6-Chloro-2-ethoxypyrimidin-4-amine (C192759) be stored to maintain its stability?
Store the compound in a tightly sealed container at 2–8 °C (or as indicated on the CoA), in a dry, well-ventilated area away from light and moisture. After opening, reseal immediately and consider storing under an inert atmosphere (nitrogen or argon) to prevent degradation of the aryl chloride moiety through hydrolysis.
Can the aryl chloride of 6-Chloro-2-ethoxypyrimidin-4-amine be used in palladium-catalyzed cross-coupling reactions?
Yes, the C-6 aryl chloride can participate in palladium-catalyzed cross-coupling reactions such as Suzuki–Miyaura and Buchwald–Hartwig amination. Because aryl chlorides are generally less reactive than aryl bromides or iodides in these reactions, use of active palladium catalysts (e.g., Pd-PEPPSI, Pd₂(dba)₃ with bulky phosphine ligands) and optimization of reaction conditions is recommended.
What purity grade does Aladdin Scientific provide for C192759, and how can I verify it?
Aladdin Scientific provides C192759 with purity confirmed by HPLC; the specific purity value is stated on the lot Certificate of Analysis (CoA). You can verify purity in-house using HPLC-UV, LC-MS, or NMR spectroscopy as described in the analytical characterization section. Contact Aladdin Scientific customer service to request the CoA for your specific lot.
Is 6-Chloro-2-ethoxypyrimidin-4-amine suitable for use in biological assays directly?
This compound is supplied as a research-grade chemical intermediate, primarily intended for synthetic chemistry applications. If you intend to use it in biological assays, ensure the solvent vehicle is compatible with your assay system, confirm purity from the CoA, and consult relevant literature or conduct appropriate cytotoxicity assessments before use.
References
- March, J.; Smith, M. B. March's Advanced Organic Chemistry: Reactions, Mechanisms, and Structure, 7th ed.; Wiley: Hoboken, NJ, 2013. (General reference for nucleophilic aromatic substitution and cross-coupling reactions.)
- Küenburg, B.; Czollner, L.; Bracher, F.; Jordis, U. Development of a Pilot-Scale Process for the Anti-Alzheimer Drug (−)-Galanthamine Using Large-Scale Pd-Catalysed Reactions. Org. Process Res. Dev. 1999, 3, 425–431. (Cited as general context for SNAr and palladium chemistry on heterocycles; specific applicability to this compound needs review.) doi:10.1021/op990025c
- Joule, J. A.; Mills, K. Heterocyclic Chemistry, 5th ed.; Wiley-Blackwell: Oxford, 2010. (General reference for pyrimidine chemistry and reactivity.)
Products are supplied for research and development use only. Not for use in humans, animals, diagnosis, or therapy.
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