cis-Boc-Aminocyclopropane Methyl Ester: Key Facts & FAQs
cis-Boc-Aminocyclopropane Methyl Ester: Key Facts & FAQs
cis-cyclopropanecarboxylic acid, 2-[[(1,1-dimethylethoxy)carbonyl]amino]-, methyl ester is a Boc-protected cis-aminocyclopropane methyl ester widely employed as a stereoretentive building block in the synthesis of peptidomimetics, constrained amino acid analogues, and pharmaceutical intermediates.
- Product SKU
- C174931
- IUPAC Name
- methyl (1R,2S)-2-[(tert-butoxycarbonyl)amino]cyclopropane-1-carboxylate (cis isomer)
- Stereochemistry
- cis (syn) relative configuration at the cyclopropane ring
- Protecting Group
- tert-Butoxycarbonyl (Boc) on the amine; methyl ester on the carboxylate
- Primary Application
- Building block for peptidomimetics, constrained amino acid analogues, and medicinal chemistry
- Supplier
- Aladdin Scientific
What Is cis-Boc-Aminocyclopropane Methyl Ester and Why Is It Used?
cis-Cyclopropanecarboxylic acid, 2-[[(1,1-dimethylethoxy)carbonyl]amino]-, methyl ester (Aladdin SKU C174931) is a bifunctionally protected cyclopropane derivative bearing a Boc-amino group and a methyl ester on adjacent carbons in the cis (syn) configuration. The strained, rigid cyclopropane ring enforces a defined spatial relationship between the two functional groups, making this compound a valuable conformationally constrained building block.
In medicinal chemistry and peptidomimetic research, constrained analogues are introduced to improve metabolic stability, binding selectivity, and bioavailability of peptide leads. The Boc group provides orthogonal amine protection compatible with standard Fmoc or Cbz solid-phase and solution-phase strategies, while the methyl ester offers a readily hydrolysable or reducible handle for further elaboration.
Chemical Identity, Structure, and Stereochemistry
The compound belongs to the class of cyclopropane amino acid derivatives. The cyclopropane ring carries two substituents in a cis relationship: a methoxycarbonyl (methyl ester) group and a tert-butoxycarbonylamino (NHBoc) group. This cis relative configuration distinguishes it from the corresponding trans isomer, which would place the two groups on opposite faces of the ring.
Key structural features include:
- Ring strain: The cyclopropane ring provides conformational rigidity and a unique electronic environment that can mimic a peptide bond geometry or a gamma-amino acid scaffold.
- Orthogonal protection: The Boc group is removable under mild acid conditions (e.g., TFA in DCM or HCl in dioxane) without affecting the methyl ester; conversely, the ester can be saponified under basic conditions without disturbing the Boc group under controlled temperatures.
- Stereodefined starting material: The defined cis stereochemistry allows stereocontrolled synthesis of target molecules where absolute or relative configuration is critical.
Handling, Storage, and Safety Considerations
As with most Boc-protected amino building blocks, cis-cyclopropanecarboxylic acid, 2-[[(1,1-dimethylethoxy)carbonyl]amino]-, methyl ester should be handled following standard laboratory safety protocols. Specific safety data should be consulted in the product Safety Data Sheet (SDS) provided by Aladdin Scientific before use.
General handling guidelines include:
- Store in a cool, dry, well-ventilated area, away from heat, moisture, and incompatible materials such as strong oxidisers and strong bases.
- Use appropriate personal protective equipment (PPE): lab coat, chemical-resistant gloves, and safety glasses.
- Weigh and handle in a fume hood to minimise inhalation exposure to fine particulates or vapours.
- Reseal packaging promptly under inert atmosphere (nitrogen or argon) if the compound is moisture- or air-sensitive, as determined by the SDS.
Note: Always refer to the official Aladdin Scientific SDS for authoritative hazard classification, first-aid measures, and disposal guidance specific to lot C174931.
Typical Synthetic Applications and Reactivity
The dual-protected cis isomer (C174931) is particularly suited to sequential deprotection and coupling strategies:
- Boc removal followed by amide bond formation: Treatment with TFA liberates the free amine, which can then be coupled to carboxylic acid partners using standard reagents (HATU, EDC/HOBt, etc.) to build peptidomimetic sequences.
- Ester hydrolysis to reveal carboxylic acid: Saponification with LiOH or NaOH provides the free cis-amino acid (still Boc-protected), which can be used directly in peptide coupling reactions.
- Reduction of methyl ester: DIBAL-H or LiAlH4 reduction of the ester gives the corresponding amino alcohol, a useful precursor to cyclopropane-containing heterocycles or further functionalised scaffolds.
- Ring-opening chemistry: Under certain nucleophilic or electrophilic conditions, the activated cyclopropane ring may undergo ring-opening to generate homoallylic or other open-chain intermediates, though controlled conditions are required to avoid undesired side reactions.
The rigid cis geometry enforces close proximity of the amino and ester groups, facilitating intramolecular reactions such as lactamisation under appropriate conditions to yield beta-lactam or diketopiperazine-type products.
Ordering, Availability, and Quality at Aladdin Scientific
cis-Cyclopropanecarboxylic acid, 2-[[(1,1-dimethylethoxy)carbonyl]amino]-, methyl ester is available from Aladdin Scientific under SKU C174931. Researchers and procurement teams can place orders through the Aladdin Scientific website or contact the sales team for bulk pricing, custom pack sizes, and lead-time enquiries.
Quality assurance at Aladdin Scientific typically encompasses identity confirmation by NMR and/or MS, purity assessment by HPLC or GC, and lot-specific Certificates of Analysis (CoA) available on request. Customers are encouraged to review the CoA for the specific lot received to confirm compliance with their application requirements.
For questions regarding payment, pricing, promotions, returns, shipping, or account management, please contact Aladdin Scientific customer service directly via the support portal.
Frequently asked questions
What is the difference between the cis and trans isomers of Boc-aminocyclopropane methyl ester, and does stereochemistry matter for my synthesis?
In the cis isomer (C174931), the NHBoc and methyl ester substituents are on the same face of the cyclopropane ring, enforcing a syn spatial relationship. In the trans isomer, they are on opposite faces. This difference in relative configuration profoundly affects the three-dimensional shape of any molecule built from these scaffolds, influencing receptor binding, enzyme substrate recognition, and intramolecular reactivity such as lactamisation. For applications requiring a defined peptidomimetic geometry or stereospecific biological activity, selecting the correct isomer is essential.
How do I remove the Boc protecting group from C174931 without damaging the methyl ester?
The Boc group can be selectively removed under standard mild acid conditions, most commonly by treating the compound with trifluoroacetic acid (TFA, typically 20–50% v/v) in dichloromethane (DCM) at room temperature for 30–60 minutes, or with 4 M HCl in 1,4-dioxane. Under these conditions, the methyl ester remains intact because it is not susceptible to acidolysis at these concentrations and temperatures. The resulting amine salt should be neutralised carefully before subsequent coupling steps. Always optimise conditions at small scale before committing to a full batch.
What are the recommended storage conditions for SKU C174931?
General best practice for Boc-protected amino building blocks is to store them in a cool, dry place away from light and moisture, typically at 2–8 °C or at room temperature as specified on the product label and Certificate of Analysis. The container should be kept tightly sealed and, where indicated, under an inert atmosphere. Always consult the Aladdin Scientific product page and the lot-specific SDS and CoA for the authoritative storage specification, as conditions can vary by formulation and purity grade.
Can C174931 be used directly in solid-phase peptide synthesis (SPPS)?
C174931 can be incorporated into solid-phase peptide synthesis workflows, but typically requires ester hydrolysis to the free carboxylic acid first, since SPPS coupling requires an activated carboxyl group. The methyl ester can be saponified (e.g., with LiOH in THF/water) to yield the Boc-protected free acid, which is then activated in situ with standard coupling reagents (HATU, HBTU, DIC/Oxyma, etc.) for resin loading or chain elongation. Alternatively, the Boc group can be removed to provide the free amine for on-resin acylation with another activated acid component.
How do I request a Certificate of Analysis (CoA) or Safety Data Sheet (SDS) for C174931?
Certificates of Analysis and Safety Data Sheets for SKU C174931 are available through the Aladdin Scientific website. Navigate to the product page for C174931 and use the documentation download links, or contact Aladdin Scientific customer service with your lot number to request the documents directly. Having the lot number from your packaging ensures you receive documents specific to your batch.
References
- Brackmann F, de Meijere A. Natural Occurrence, Synthesis, and Applications of Cyclopropyl-Group-Containing α-Amino Acids. Chemical Reviews. 2007;107(11):4493–4537. doi:10.1021/cr050997+
- Gnad F, Reiner J, Schmiedekamp A, et al. Conformationally constrained amino acids: Synthesis and applications in medicinal chemistry and chemical biology. Chemical Society Reviews. 2010 (general reference — specific volume/page needs verification).
- Greene TW, Wuts PGM. Protective Groups in Organic Synthesis. 4th ed. Wiley-Interscience; 2007. Chapter on nitrogen protecting groups (Boc).
- Aladdin Scientific. Product page and Certificate of Analysis for cis-cyclopropanecarboxylic acid, 2-[[(1,1-dimethylethoxy)carbonyl]amino]-, methyl ester, SKU C174931.
Products are supplied for research and development use only. Not for use in humans, animals, diagnosis, or therapy.
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