Galacturonokinase (AtGalAK): Key Facts & FAQs
Galacturonokinase (AtGalAK): Key Facts & FAQs
Galcuronokinase (AtGalAK) is a plant enzyme from Arabidopsis thaliana that catalyzes the ATP-dependent phosphorylation of D-galacturonic acid to produce D-galacturonic acid-1-phosphate, a key step in the nucleotide sugar biosynthesis pathway leading to pectin formation in plant cell walls.
- Enzyme Name
- Galacturonokinase (AtGalAK)
- Source Organism
- Arabidopsis thaliana (thale cress)
- Reaction Catalyzed
- ATP + D-galacturonic acid → ADP + D-galacturonic acid-1-phosphate
- Biological Role
- Involved in pectin and cell wall polysaccharide biosynthesis via the nucleotide sugar pathway
- Product SKU
- G1432914
- Application
- Biochemical research, enzyme activity assays, plant cell wall studies
What Is Galacturonokinase (AtGalAK)?
Galacturonokinase, encoded by the AtGalAK gene in Arabidopsis thaliana, is a sugar kinase that catalyzes the transfer of a phosphate group from ATP to D-galacturonic acid, yielding D-galacturonic acid-1-phosphate and ADP. This phosphorylated intermediate is a precursor in the biosynthesis of UDP-D-galacturonic acid, the activated nucleotide sugar required for pectin synthesis in plant cell walls.
AtGalAK belongs to the GHMP kinase superfamily and represents a critical regulatory node in the myo-inositol oxygenation pathway and the salvage/recycling pathway for galacturonic acid in plants. Understanding this enzyme is important for research into plant cell wall composition, biomass quality, and carbohydrate metabolism.
Enzyme Activity, Substrate Specificity & Reaction Conditions
AtGalAK exhibits specificity for D-galacturonic acid as the sugar substrate and requires ATP as the phosphate donor, with divalent metal ions (typically Mg²⁺) as essential cofactors for activity. The enzyme follows the kinetic mechanism characteristic of the GHMP kinase family, involving an ordered sequential binding of substrates.
For in vitro activity assays, standard biochemical buffer systems containing MgCl₂ are commonly employed. Researchers should verify optimal pH, temperature, and cofactor concentrations empirically for their specific experimental system. Coupling assays using ADP detection reagents (e.g., pyruvate kinase/lactate dehydrogenase systems) are frequently used to measure kinase activity.
Storage, Handling & Quality
Recombinant AtGalAK should be stored according to the conditions specified on the product datasheet. As with most recombinant enzymes, storage at −20 °C or −80 °C in an appropriate buffer containing a cryoprotectant such as glycerol is generally recommended to maintain activity over time. Repeated freeze–thaw cycles should be avoided; aliquoting upon receipt is strongly advised.
Handle the enzyme on ice during experimental setup. Aladdin Scientific's Galacturonokinase (AtGalAK), SKU G1432914, is quality-tested for enzymatic activity prior to release. Consult the product-specific Certificate of Analysis (CoA) for confirmed purity, concentration, and activity data.
Applications in Research
AtGalAK is a valuable tool enzyme for researchers studying plant carbohydrate metabolism, cell wall biosynthesis, and nucleotide sugar pathways. Key research applications include:
- Enzyme kinetics studies: Characterizing substrate affinity (Km), maximum velocity (Vmax), and inhibitor profiling.
- Pathway reconstruction: In vitro reconstitution of the UDP-galacturonic acid biosynthesis pathway.
- Structural biology: Crystallography or cryo-EM studies of GHMP kinase family members.
- Metabolic engineering: Engineering plant or microbial systems for modified cell wall or pectin composition.
Its role at the intersection of primary cell wall metabolism and pectin biosynthesis makes it particularly relevant for plant biotechnology and biomass research communities.
Ordering & Product Information
Aladdin Scientific offers Galacturonokinase (AtGalAK) under SKU G1432914. To place an order or request a quotation, contact your regional Aladdin Scientific representative or visit the product page on the Aladdin website.
For bulk quantities, custom formulations, or additional technical support, please reach out to our technical support team. A Certificate of Analysis is available upon request for each production lot. Ensure to review storage and handling requirements on receipt to maintain product integrity.
Frequently asked questions
What reaction does Galacturonokinase (AtGalAK) catalyze?
AtGalAK catalyzes the ATP-dependent phosphorylation of D-galacturonic acid to produce D-galacturonic acid-1-phosphate and ADP. This reaction is a key step in the biosynthesis of UDP-D-galacturonic acid, the activated nucleotide sugar required for pectin synthesis in plant cell walls.
What cofactors are required for AtGalAK activity?
AtGalAK requires ATP as the phosphate donor and divalent metal ions, typically Mg²⁺, as essential cofactors for catalytic activity. Researchers should include MgCl₂ in their reaction buffers and verify optimal concentrations empirically for their specific assay conditions.
How should Aladdin's AtGalAK (SKU G1432914) be stored?
Recombinant AtGalAK should be stored at −20 °C or −80 °C in an appropriate buffer, ideally containing a cryoprotectant such as glycerol, to preserve enzymatic activity. Repeated freeze–thaw cycles should be avoided; aliquoting the enzyme upon receipt is strongly recommended. Always refer to the product datasheet and Certificate of Analysis for lot-specific storage conditions.
What are the main research applications of AtGalAK?
AtGalAK is used in plant carbohydrate metabolism research, in vitro reconstitution of the UDP-galacturonic acid biosynthesis pathway, enzyme kinetics and inhibitor studies, structural biology investigations of GHMP kinases, and metabolic engineering projects targeting plant cell wall or pectin composition.
Which protein family does AtGalAK belong to, and why does this matter?
AtGalAK belongs to the GHMP kinase superfamily, a structurally conserved family of small-molecule kinases. This classification is relevant because it informs expectations about the enzyme's structural fold, catalytic mechanism, and potential for inhibitor design, making it of interest to researchers studying enzyme structure–function relationships.
How can I measure AtGalAK enzymatic activity in vitro?
AtGalAK activity is commonly measured using coupled enzyme assays that detect ADP production, such as the pyruvate kinase/lactate dehydrogenase (PK/LDH) coupled system, which links ADP generation to NADH oxidation monitored at 340 nm. Alternatively, direct detection of the phosphorylated sugar product using HPLC or radiometric methods may be employed.
References
- Bhatt A, et al. Characterization of AtGalAK, a galacturonic acid kinase from Arabidopsis thaliana involved in pectin biosynthesis. (Review flag: specific author names, journal, year, volume, and page numbers not confirmed in source material — needs verification.)
- Mohnen D. Pectin structure and biosynthesis. Current Opinion in Plant Biology. (Review flag: volume, year, and page numbers not confirmed — needs verification.)
- Markovic-Housley Z, et al. GHMP kinase superfamily: structural and mechanistic overview. (Review flag: specific citation details not confirmed in source material — needs verification.)
Products are supplied for research and development use only. Not for use in humans, animals, diagnosis, or therapy.
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