tert-Butyl N-[(1R,2S,5S)-2-amino-5-(dimethylcarbamoyl)cyclohexyl]carbamate Oxalate FAQ
tert-Butyl N-[(1R,2S,5S)-2-amino-5-(dimethylcarbamoyl)cyclohexyl]carbamate Oxalate FAQ
tert-butyl N-[(1R,2S,5S)-2-amino-5-(dimethylcarbamoyl)cyclohexyl]carbamate oxalate is a stereodefined, Boc-protected diamine building block supplied as its oxalate salt, widely employed as a synthetic intermediate in the preparation of complex pharmaceutical and research compounds requiring precise stereocontrol at multiple cyclohexane ring positions.
- Chemical Name
- tert-butyl N-[(1R,2S,5S)-2-amino-5-(dimethylcarbamoyl)cyclohexyl]carbamate oxalate
- SKU / Catalog Number
- T172592
- Functional Class
- Boc-protected chiral diamine; oxalate salt form of a cyclohexane synthetic intermediate
- Stereochemistry
- Defined stereocenters at positions 1R, 2S, and 5S of the cyclohexane ring
- Key Functional Groups
- tert-Butoxycarbonyl (Boc) carbamate, primary amine (as oxalate salt), N,N-dimethylamide (dimethylcarbamoyl)
- Recommended Storage
- Store in a cool, dry place away from moisture and light; refer to the product SDS for full conditions
What Is tert-Butyl N-[(1R,2S,5S)-2-Amino-5-(dimethylcarbamoyl)cyclohexyl]carbamate Oxalate?
tert-Butyl N-[(1R,2S,5S)-2-amino-5-(dimethylcarbamoyl)cyclohexyl]carbamate oxalate (Aladdin SKU: T172592) is a chiral, polyfunctional cyclohexane derivative featuring three contiguous stereocenters (1R, 2S, 5S). The molecule carries three key functional groups: a tert-butoxycarbonyl (Boc)-protected secondary amine, a free primary amine stabilized as its oxalate salt, and an N,N-dimethylamide (dimethylcarbamoyl) substituent.
The oxalate salt form is commonly adopted to improve the stability and handling characteristics of the free amine, which can otherwise be hygroscopic or prone to degradation. This salt form also facilitates accurate weighing and long-term storage without significant loss of chemical integrity.
Because it presents two orthogonally addressable nitrogen functionalities and a well-defined three-dimensional scaffold, this compound serves as a versatile building block in medicinal chemistry and process chemistry for the assembly of complex target molecules.
Handling, Storage and Safety Considerations
Storage: Store the compound in a tightly sealed container in a cool, dry location away from direct light and sources of moisture. Specific temperature recommendations (e.g., refrigeration at 2–8 °C or ambient) should be confirmed by consulting the Certificate of Analysis (CoA) and Safety Data Sheet (SDS) provided with the product, as conditions may vary by lot.
Handling: As with all fine chemicals containing reactive amine functionality, standard laboratory precautions apply: use appropriate personal protective equipment (PPE) including nitrile gloves, safety glasses, and a lab coat. Weigh the compound in a well-ventilated area or fume hood. The oxalate salt is an acid salt; avoid contact with strong bases or oxidizers.
Stability: The Boc group is acid-labile and will cleave under strongly acidic conditions (e.g., TFA or HCl in organic solvent). Avoid prolonged exposure to acidic environments during storage. The oxalate counterion is stable under normal storage conditions but should not be confused with the free base form when preparing stock solutions.
Disposal: Dispose of residues and solutions in accordance with local regulations governing organic chemical waste. Consult the SDS for hazard classification details.
Synthetic Applications and Use in Research
The combination of a Boc-protected amine and a free primary amine (as oxalate salt) on a rigid, stereodefined cyclohexane scaffold makes this compound a highly attractive intermediate for multi-step synthesis. Researchers can selectively deprotect the Boc group under mild acidic conditions to unmask the secondary amine, while the primary amine can be engaged in acylation, reductive amination, sulfonylation, or coupling reactions — either sequentially or in a differentiated one-pot strategy.
The dimethylcarbamoyl group introduces an amide bioisostere motif commonly exploited in medicinal chemistry to modulate solubility, metabolic stability, and target binding. Cyclohexane-based scaffolds with defined stereocenters are privileged structures in drug discovery, offering conformational rigidity that can translate into improved selectivity and potency at biological targets.
Typical applications include: (1) construction of kinase inhibitor scaffolds, (2) assembly of protease inhibitor pharmacophores, (3) synthesis of GPCR-targeted ligands, and (4) use as a chiral linker or amine fragment in DNA-encoded chemical library (DEL) synthesis. Users should optimize reaction conditions (solvent, base, temperature) for their specific coupling partners.
Purity, Quality and Analytical Specifications
Aladdin Scientific supplies T172592 with a purity specification confirmed by standard analytical techniques such as high-performance liquid chromatography (HPLC) and nuclear magnetic resonance (NMR) spectroscopy. The Certificate of Analysis (CoA) accompanying each lot provides the specific purity value, appearance description, and analytical data for that batch.
Stereochemical integrity is a critical quality attribute for this compound. The defined 1R,2S,5S configuration should be confirmed by optical rotation measurement and/or chiral HPLC as reported on the CoA. Users who require independent verification of stereochemical purity are advised to perform chiral analytical methods in-house.
When preparing solutions, account for the oxalate salt form: the molecular weight used for molarity calculations must correspond to the salt (free base + oxalic acid), not the free base alone. Consult the product page or CoA for the exact molecular weight of the salt form. Solubility is typically best assessed empirically in the intended solvent system (e.g., DMSO, water, methanol) prior to large-scale use.
Ordering, Availability and Customer Support
tert-Butyl N-[(1R,2S,5S)-2-amino-5-(dimethylcarbamoyl)cyclohexyl]carbamate oxalate is available from Aladdin Scientific under catalog number T172592. To place an order, visit the Aladdin Scientific website, search for the catalog number or product name, select the required quantity and grade, and proceed through the standard checkout process.
For bulk quantities, custom synthesis inquiries, or requests for additional analytical data (e.g., chiral purity reports, additional NMR spectra), please contact Aladdin Scientific customer support directly via the contact details listed on the website. Lead times may vary depending on stock availability and order volume.
If you have technical questions about this product — including recommended reaction conditions, compatibility with specific reagents, or troubleshooting synthesis issues — our technical support team is available to assist. References to published literature using structurally similar building blocks may also be provided upon request, subject to availability.
Frequently asked questions
What is the difference between the free base and the oxalate salt form of this compound?
The free base form contains the unprotonated primary amine, while the oxalate salt is formed by protonation of the amine with oxalic acid, yielding a more stable, easier-to-handle solid. When preparing solutions or reactions, you must use the molecular weight of the salt form for accurate molarity calculations, and you may need to add a suitable base (e.g., triethylamine, DIPEA) to liberate the free amine in situ for certain reactions.
How do I selectively remove the Boc protecting group without affecting the dimethylcarbamoyl group?
The Boc group is selectively cleaved under mild acidic conditions, most commonly using trifluoroacetic acid (TFA) in dichloromethane (typically 20–50% v/v) or 4 M HCl in dioxane at room temperature. The N,N-dimethylamide (dimethylcarbamoyl) group is stable to these conditions, as amides are not cleaved by the mild acids used for Boc removal. After deprotection, the resulting amine is obtained as its TFA or HCl salt, which can be neutralized as needed.
What solvents are recommended for dissolving T172592?
As an oxalate salt of a polar amine, T172592 is expected to show good solubility in polar protic solvents such as water and methanol, and reasonable solubility in dimethyl sulfoxide (DMSO). Solubility in nonpolar organic solvents (e.g., hexane, diethyl ether) is expected to be low. Users should empirically test solubility in their intended solvent system at the required concentration before proceeding with large-scale experiments, as solubility can be lot- and concentration-dependent.
Is the stereochemical configuration of T172592 verified analytically?
Yes, the stereochemical configuration (1R,2S,5S) is specified as part of the product definition, and analytical data supporting stereochemical identity and purity are reported on the Certificate of Analysis (CoA) for each lot. Users who require additional verification should perform chiral HPLC analysis or optical rotation measurements in-house using the CoA values as a reference benchmark.
Can T172592 be used directly in amide coupling reactions?
T172592 can participate in amide coupling reactions through its primary amine functionality (after liberation from the oxalate salt with a suitable base). Standard peptide coupling reagents such as HATU, HBTU, EDC/HOBt, or DIC/HOBt are compatible with primary aliphatic amines. It is advisable to first neutralize the oxalate salt in situ by adding a tertiary base (e.g., DIPEA, 2–3 equivalents) before or during the coupling reaction to ensure the free amine is available for reaction.
References
- Greene, T. W.; Wuts, P. G. M. Protective Groups in Organic Synthesis, 4th ed.; Wiley-Interscience: New York, 2007. (General reference for Boc protection and deprotection strategies.)
- Clayden, J.; Greeves, N.; Warren, S. Organic Chemistry, 2nd ed.; Oxford University Press: Oxford, 2012. (Textbook reference for amide chemistry, amine reactivity, and salt forms.)
- Aladdin Scientific. Product Certificate of Analysis for T172592: tert-butyl N-[(1R,2S,5S)-2-amino-5-(dimethylcarbamoyl)cyclohexyl]carbamate oxalate. (Available on request from Aladdin Scientific.)
Products are supplied for research and development use only. Not for use in humans, animals, diagnosis, or therapy.
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