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ANALYTICAL CHEMISTRY · 2014 · IF 5.825

Establishing Water-Soluble Layered WS2 Nanosheet as a Platform for Biosensing

Yunxia Yuan,Runqing Li,Zhihong Liu

Layered WS2 nanosheet is a kind of two-dimensional (2D) covalent-network solid material with remarkable structural and electronic properties that has attracted increasing interest in recent years. In this work, we propose a one-step sonication-assisted exfoliation method to prepare water-soluble WS2 nanosheet and demonstrate its application as a biosensing platform. The synthesis route is simple and straightforward. We reveal that single-strand DNA (ssDNA) chains can readily be adsorbed on the nanosheet, leading to complete and fast quenching of a fluorescent dye tagged to the DNA chain. The adsorbed ssDNA is detachable from the nanosheet upon the interaction with other biomolecules, resulting in the restoration of the fluorescence. The 2D WS2 nanosheet thus acts as an efficient platform for assembling of bioprobes. Because of the extraordinarily high quenching efficiency, which is the synergic result of both excited-state energy transfer and static quenching, the WS2 platform affords minimal background and high sensitivity. Our attempt will extend the application of this material to biosensing and probing areas.

CAS / MDL: 12138-09-9
研究领域: 材料科学 · 纳米技术 · 生物传感器 · 分析化学
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Nanoscale Horizons · 2025 · IF 6.6

A phosphomolybdenum blue nano-photothermal agent with dual peak absorption and biodegradable properties based on ssDNA in near-infrared photothermal therapy for breast cancer

Baoru Fang,Siqi Geng,Ke Wang,Fang Wang,Yiqing Zhou,Jiaying Qin,Shengnan Luo,Yanping Chen,Zhangsen Yu

Photothermal therapy (PTT) stands as an emerging and promising treatment modality and is being developed for the treatment of breast cancer, prostate cancer, and a series of superficial tumors. This innovative approach harnesses photothermal agents (PTAs) that convert near-infrared light (NIR) energy into heat, efficiently heating and ablating localized lesion tissue. Notably, the low scattering of NIR-II (1000–1500 nm) band light within biological tissue ensures superior penetration depth, surpassing that of NIR I (700–900 nm) band light. Consequently, developing PTAs with excellent absorption performance and biocompatibility in the NIR-II band has attracted significant attention in photothermal therapy research. We successfully synthesized phosphomolybdenum blue (PMB) nanoparticles using single-strand DNA (ssDNA) as a template in this innovative study. Subsequently, we delved into this material's absorption characteristics and photothermal properties across the NIR-I and NIR-II spectral regions. Furthermore, we evaluated the therapeutic efficacy of PMB on 4T1 cells and tumor-bearing mouse models of breast cancer. Our findings revealed that PMB not only exhibits remarkable biocompatibility but also possesses stellar photothermal performance. Specifically, under 808 nm and 1064 nm laser irradiation, PMB achieved photothermal conversion efficiencies of 21.37% and 28.84%, respectively. Notably, compared to 808 nm laser irradiation, even when transmitting through a 2 mm thick tumor tissue homogenate, the 1064 nm laser irradiation maintained a robust tumor ablation effect. What's more, PMB possesses critical pH-responsive degradation properties. For instance, PMB nanoparticles degrade rapidly under physiological conditions (pH 7.2–7.4) while degrading slower in the acidic tumor microenvironment (pH 6.0–6.9). This unique characteristic significantly mitigates the systemic toxicity of PMB and enhances the safety of photothermal therapy implementation. Moreover, our study represents the first instance of utilizing ssDNA as a template for synthesizing a PMB nano photothermal agent and demonstrating its exceptional tumor thermal ablation efficacy. This groundbreaking work offers novel insights into the development of safe, efficient, and pH-responsive photothermal agents for cancer therapy.

研究领域: 生物医学工程 · 肿瘤学 · 纳米医学
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SENSORS AND ACTUATORS B-CHEMICAL · 2023 · IF 8.4

ATP and ssDNA aptamer-mediated peroxidase-like activity of rGO@PDA@CeO2 nanozyme: Exosomal proteins profiling and detection at physiological pH for colorimetric sensor

Jingjing Kuang,Shengli Ruan,Yangkun Sun,Zeyu Wu,Jiayao Xu,Ting Zhang,Xiaofan You,Shiman Yang,Min Zhang,Hongyang Zhang,Ping Hu

Exosomes are extracellular vesicles that inherit molecular markers from their parent cells for the transfer and delivery of membrane and cytosolic molecules between cells. Exosome detection and protein profiling provide noninvasive access to disease diagnosis and treatment. The nanozyme designed in this paper contains polydopamine-functionalization of graphene oxide (rGO@PDA) units that can adsorb ssDNA aptamers and CeO 2 metal oxide nanosheet units with peroxidase activity. As auxiliary regulator, adenosine triphosphate (ATP) enhances peroxidase activity of rGO@PDA@CeO 2 under a wide range of pH (4–7.4), which breaks through the limitation that traditional nanozymes can only exhibit peroxidase activity under acidic conditions. The ssDNA aptamers, which are recognition probes of exosome, can be adsorbed on the surface of rGO@PDA by aromatic stacking, competing with ATP molecules. Thus, the ssDNA aptamer acts as the switch for colorimetric sensor to flexibly regulate the peroxidase activity of the rGO@PDA@CeO 2 under physiological conditions , and realizes sensitive detection of exosomes. This assay achieves a detection linear range of 0.46 × 10 7 –10 8 particle/mL and a limit down to 3.81 × 10 5 particles/mL. In addition, this aptasensor sensitively profiles six exosomal protein across five cell types and clinical samples, suggesting their potential in clinic diagnosis.

CAS / MDL: 62-31-7
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MICROCHIMICA ACTA · 2018 ·Vol. 185 ·期 10 ·1-8 · IF 5.705

Colorimetric determination of mercury(II) via the inhibition by ssDNA of the oxidase-like activity of a mixed valence state cerium-based metal-organic framework

Wang Caihong,Tang Gonge,Tan Hongliang

This work demonstrates the inhibition effects of single-stranded (ssDNA) on the oxidase-like activity of a mixed-valence state cerium-based metal-organic framework, denoted as MVC-MOF. The MVC-MOF was synthesized by partial oxidation of cerium(III) which leads to the presence of both Ce(III) and Ce(IV) ions. The latter endows the MVC-MOF with a typical oxidase-like activity. However, on addition of ssDNA, the catalytic activity of the MVC-MOF is inhibited because it binds the MVC-MOF and thereby shield its active sites. This prevents the access of substrates. The inhibition by ssDNA depends on its length but not its sequence. By contrast, negligible changes in the oxidase-mimicking activity are observed if double-stranded DNA (dsDNA) is added. By employing a thymine-rich ssDNA (T-ssDNA) as a model DNA, a colorimetric assay was developed for the determination of Hg(II). This ion binds to T-ssDNA and causes the formation of T-dsDNA. Hence, the oxidase-mimicking activity is compromised. By using the oxidase substrate 3,3′,5,5′-tetramethylbenzidine that gives a colored product in the presence of oxygen, the assay has a linear response that covers 0.05 to 6 μM Hg(II) with a detection limit of 10.5 nM, and exhibits high selectivity over other metal ions. The assay was successfully applied to the determination of Hg(II) in environmental water samples. Schematic of the inhibition effect of ssDNA on the oxidase-like activity of MVC-MOF that converts colorless TMB to oxTMB with blue color in the presence of oxygen, and its application in the construction of a colorimetric assay for Hg(II) determination.

研究领域: 分析化学 · 环境科学 · 生物化学
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NEW JOURNAL OF CHEMISTRY · 2017 ·Vol. 41 ·期 17 ·9230-9235 · IF 3.269

A turn-on fluorescence aptasensor based on carbon dots for sensitive detection of adenosine

Xin Shen,Lei Xu,Wanying Zhu,Bingzhi Li,Junli Hong,Xuemin Zhou

In this paper, a novel turn-on fluorescence aptasensor has been designed for adenosine detection based on fluorescence resonance energy transfer (FRET) from single-stranded DNA labeled carbon dots (ssDNA-CDs) to aptamer modified gold nanoparticles (aptamer-AuNPs). In the absence of adenosine, the fluorescence of ssDNA-CDs was quenched by aptamer-AuNPs via the formation of an aptamer–ssDNA duplex. The introduced adenosine competed to displace ssDNA-CDs by specifically binding to the aptamer, resulting in the recovery of the quenched fluorescence of ssDNA-CDs. Under optimized conditions, the increase in fluorescence intensity was proportional to the concentration of adenosine with a linear range of 10–500 nM and allowed a limit of detection as low as 4.2 nM. In addition, this method was successfully applied to adenosine determination in human serum samples with satisfactory results.

研究领域: 分析化学 · 纳米技术 · 生物传感器
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JOURNAL OF FLUORESCENCE · 2015 ·Vol. 25 ·期 5 ·1267-1277 · IF 1.927

Fluorescence Detection of Single DNA Molecules

Huang Weidong,Wang Yue,Wang Zhimin

Single-molecule detection (SMD) and single-molecule fluorescence resonance energy transfer (smFRET) were conducted using Cy3- and Cy5-labeled single-strand DNAs (ssDNAs) either immobilized on substrates or encapsulated in microdroplets. High-quality fluorescent images were obtained using a total internal reflection fluorescence microscope (TIRFM). In the substrate system, deposition of a low concentration of fluorescence molecules on substrates through electrostatic adsorption showed that most of the fluorescence spots were single molecules, and the mean value of signal to noise ratio (S/N) reached 6.9 ± 0.34. smFRET analysis was conducted through immobilization of donor- and acceptor-labeled oligonucleotides on substrates. In the droplet system, fluorophor-labeled oligonucleotides were injected into T-type microfluidics. Single and double fluorophor-labeled DNA molecules encapsulated in droplets were detected, the FRET efficiency and inter-dye distance of a single donor-acceptor pair were measured accurately. smFRET was conducted detailedly in the tortuous channel for the first time.

CAS / MDL: 919-30-2
研究领域: 生物化学 · 分子生物学 · 生物物理学
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Scientific Reports · 2018 ·Vol. 8 ·期 1 ·1-8 · IF 4.122

Turn-off colorimetric sensor for sequence-specific recognition of single-stranded DNA based upon Y-shaped DNA structure

Zhang Hong,Li Xintong,He Fan,Zhao Mingqin,Ling Liansheng

A novel turn-off colorimetric sensor for sequence-specific recognition of single-stranded DNA (ssDNA) was established by combining Y-shaped DNA duplex and G-quadruplex-hemin DNAzyme. A G-rich single-stranded DNA (Oligo-1) displays peroxidase mimicking catalytic activity due to the specific binding with hemin in the presence of K + , which was able to catalyze the oxidation of colorless 2,2′-azinobis(3-ethylbenzothiazoline)-6-sulfonic acid (ABTS 2− ) by H 2 O 2 to generate green ABTS− radical for colorimetric assay. Oligonucleotide 2 (Oligo-2) was partly complementary with Oligo-1 and the target DNA. Upon addition of target DNA, Oligo-1, Oligo-2 and target DNA can hybridize with each other to form Y-shaped DNA duplex. The DNAzyme sequence of Oligo-1 was partly caged into Y-shaped DNA duplex, resulting in the inactivation of the DNAzyme and a sharp decrease of the absorbance of the oxidation product of ABTS 2− . Under the optimum condition, the absorbance decreased linearly with the concentration of target DNA over the range of 1.0–250 nM and the detection limit was 0.95 nM (3σ/slope) Moreover, satisfied result was obtained for the discrimination of single-base or two-base mismatched DNA.

研究领域: 生物化学 · 分子生物学 · 纳米技术 · 分析化学
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