1-Methylpyrrolidin-3-amine: Properties, Synthesis & Applications
1-Methylpyrrolidin-3-amine: Properties, Synthesis & Applications
1-methylpyrrolidin-3-amine is a saturated nitrogen-containing heterocyclic amine featuring both a tertiary N-methyl group and a primary amine at the 3-position, making it a highly versatile chiral building block widely used in medicinal chemistry and pharmaceutical research.
- IUPAC Name
- 1-methylpyrrolidin-3-amine
- Molecular Formula
- C₅H₁₂N₂
- Molecular Weight
- 100.16 g/mol
- Key Functional Groups
- Primary amine (–NH₂), tertiary amine (N-methyl)
- Ring System
- Five-membered pyrrolidine ring
- Chiral Center
- C-3 position (available as racemate or enantiomers)
- Primary Application
- Pharmaceutical intermediate and medicinal chemistry building block
Chemical Structure and Physical Properties
1-Methylpyrrolidin-3-amine (CAS registry number should be verified) belongs to the pyrrolidine family of saturated five-membered nitrogen heterocycles. Its structure comprises a pyrrolidine ring in which the ring nitrogen bears an N-methyl substituent (rendering it a tertiary amine), while the carbon at position 3 carries a primary amino group (–NH₂). This dual-nitrogen architecture confers distinct reactivity at two separate sites, enabling selective functionalization strategies valued in synthetic chemistry.
The compound has the molecular formula C₅H₁₂N₂ and a molecular weight of approximately 100.16 g/mol. As a low-molecular-weight aliphatic amine, it is expected to be a colorless to pale-yellow liquid or low-melting solid at ambient conditions, miscible with polar protic solvents such as water, methanol, and ethanol. Both the primary and tertiary amine groups are basic; the primary amine typically dominates hydrogen-bond donor capacity, whereas the tertiary N-methyl nitrogen contributes primarily as a hydrogen-bond acceptor. The C-3 position is a stereocenter, meaning the compound can exist as the (R)- or (S)-enantiomer or as the racemic mixture, each form having distinct utility in asymmetric synthesis and chiral pharmaceutical development.
Synthesis and Preparation Routes
Several established synthetic strategies provide access to 1-methylpyrrolidin-3-amine. The most common approach begins with 3-pyrrolidinol or 3-aminopyrrolidine as a commercially available starting material, followed by N-methylation at the ring nitrogen. N-Methylation can be accomplished via reductive amination using formaldehyde and a reducing agent such as sodium cyanoborohydride (NaBH₃CN) or sodium triacetoxyborohydride (NaBH(OAc)₃) under mild conditions. Alternatively, direct methylation using methyl iodide (MeI) in the presence of a base may be employed, although over-alkylation must be controlled carefully.
Enantioselective synthesis of either the (R)- or (S)-enantiomer can be achieved through asymmetric hydrogenation of prochiral precursors, chiral resolution of the racemic amine using chiral acids (e.g., tartaric acid, mandelic acid), or by starting from chiral pool amino acids and applying ring-forming reactions. When the primary amine at C-3 is introduced via reduction of a corresponding nitrile or nitro intermediate, the reaction sequence must be planned to protect the ring nitrogen appropriately. Boc-protection of the primary amine is a frequently employed strategy to differentiate the two nitrogen centers during multi-step synthesis.
Applications in Medicinal Chemistry and Drug Discovery
1-Methylpyrrolidin-3-amine is principally valued as a versatile building block in the synthesis of biologically active molecules. The pyrrolidine scaffold is a privileged structure in medicinal chemistry: it confers conformational rigidity relative to acyclic amines, improves metabolic stability compared to piperidine analogues in some cases, and provides favorable aqueous solubility owing to the basic nitrogen centers. The N-methyl group prevents unwanted N–H metabolic oxidation pathways that can limit the half-life of secondary amines.
The primary amine functionality at C-3 serves as a versatile handle for conjugation reactions. It can participate in amide bond formation with carboxylic acids or acyl chlorides, reductive amination with aldehydes and ketones, sulfonamide formation, urea and carbamate synthesis, and coupling with heterocyclic electrophiles. These transformations make 1-methylpyrrolidin-3-amine a frequent component in fragment-based drug discovery (FBDD) libraries and in the decoration of kinase inhibitor, GPCR ligand, and protease inhibitor scaffolds.
The stereochemistry at C-3 is often pharmacologically significant. Enantiomerically pure forms allow structure–activity relationship (SAR) studies that probe how three-dimensional shape affects target binding, selectivity, and ADMET properties. Researchers frequently incorporate both (R)- and (S)-forms into parallel synthesis campaigns to identify the preferred eutomer for a given biological target.
Handling, Storage, and Safety Considerations
As a primary aliphatic amine, 1-methylpyrrolidin-3-amine is expected to be corrosive and irritating to skin, eyes, and the respiratory tract. Standard laboratory precautions should be followed: use in a well-ventilated fume hood, wear appropriate personal protective equipment including chemical-resistant gloves, safety goggles, and a lab coat. Inhalation of vapors should be avoided. In the event of skin or eye contact, flush immediately with large volumes of water and seek medical attention as appropriate.
The compound should be stored in a tightly sealed container, away from strong oxidizing agents, acids, and moisture. Recommended storage conditions are typically at 2–8 °C or at room temperature under an inert atmosphere (nitrogen or argon) to prevent oxidation and moisture uptake. Consult the Safety Data Sheet (SDS) provided with the product (SKU M173360) for specific hazard classifications, GHS pictograms, first-aid measures, and disposal guidance compliant with local regulations. Proper waste disposal should follow institutional and regional chemical waste management guidelines for amine-containing compounds.
Ordering Information and Product Specifications
Aladdin Scientific supplies 1-methylpyrrolidin-3-amine under SKU M173360. Researchers should consult the product page for current available pack sizes, purity specifications (typical purity grades and analytical methods such as GC or HPLC), and pricing. For projects requiring enantiopure material, please contact Aladdin Scientific's technical support team to inquire about availability of the (R)- or (S)-enantiomers as separate catalog items or custom synthesis options.
When ordering, it is recommended to verify the required stereochemical form (racemic, (R), or (S)) and the purity grade suited to the intended application—synthetic-grade material may suffice for early exploratory work, while advanced biological evaluation typically demands higher purity (≥97% or ≥98%) and defined enantiomeric excess (ee). Aladdin Scientific's quality control documentation, including certificates of analysis (CoA), is available upon request to support regulatory and GLP compliance needs.
Frequently asked questions
What is the difference between 1-methylpyrrolidin-3-amine and 3-aminopyrrolidine?
3-Aminopyrrolidine has a secondary ring nitrogen (N–H), whereas 1-methylpyrrolidin-3-amine bears an N-methyl group at the ring nitrogen, making it a tertiary amine at that position. This methylation eliminates the ring N–H, altering basicity, hydrogen-bonding profile, and metabolic oxidation susceptibility—properties that can be strategically exploited in drug design to modulate pharmacokinetics.
Is 1-methylpyrrolidin-3-amine available in enantiomerically pure form?
The C-3 stereocenter means both (R)- and (S)-enantiomers exist. Availability of enantiopure forms depends on current catalog offerings; researchers should contact Aladdin Scientific directly (SKU M173360 page) to confirm whether specific enantiomers are stocked or obtainable via custom synthesis. Enantiomeric purity is typically characterized by chiral HPLC or optical rotation measurements.
What reactions can be performed using the primary amine group of 1-methylpyrrolidin-3-amine?
The primary amine (–NH₂) at C-3 is highly reactive and can undergo amide bond formation (with carboxylic acids, acyl chlorides, or activated esters), reductive amination (with aldehydes and ketones), sulfonamide synthesis (with sulfonyl chlorides), urea/carbamate formation (with isocyanates or chloroformates), and Schiff base formation. These reactions make the compound broadly useful for synthesizing diverse pharmacophore libraries.
How should 1-methylpyrrolidin-3-amine be stored to maintain stability?
Store in a tightly sealed container under an inert atmosphere (nitrogen or argon) at 2–8 °C or as specified on the product label and SDS. Keep away from strong oxidizers, acids, and moisture. Verify specific conditions on the certificate of analysis (CoA) for SKU M173360, as stability data may vary by batch and formulation.
What purity grades are available for research use?
Purity grades and available specifications for SKU M173360 are listed on the Aladdin Scientific product page. Typical reagent-grade amines are offered at purities of ≥95%, ≥97%, or ≥98% as determined by GC or titration. For sensitive biological assays, selecting the highest available purity minimizes interference from impurities that may exhibit off-target activity.
References
- Vitaku, E.; Smith, D. T.; Njardarson, J. T. Analysis of the structural diversity, substitution patterns, and frequency of nitrogen heterocycles among U.S. FDA approved pharmaceuticals. J. Med. Chem. 2014, 57, 10257–10274. doi:10.1021/jm501100b
- Roughley, S. D.; Jordan, A. M. The medicinal chemist's toolbox: an analysis of reactions used in the pursuit of drug candidates. J. Med. Chem. 2011, 54, 3451–3479. doi:10.1021/jm200187y
- Taylor, R. D.; MacCoss, M.; Lawson, A. D. G. Rings in drugs. J. Med. Chem. 2014, 57, 5845–5859. doi:10.1021/jm4017625
- Aladdin Scientific. Product datasheet: 1-methylpyrrolidin-3-amine, SKU M173360. Aladdin Scientific, Shanghai.
Products are supplied for research and development use only. Not for use in humans, animals, diagnosis, or therapy.
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