| M669913 | Component | 96 T | Storage | | M669913A | Buffer PLS | 50 mL | RT | | M669913B | Buffer ZB | 55 mL | RT | | M669913C | Buffer GW1 (concentrate) | 80 mL | RT | | M669913D | Buffer TB | 10 mL | RT | | M669913E | RNase A (10 mg/mL) | 0.6 mL | RT | | M669913F | Magbeads PN | 2×1 mL | RT |
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产品简介
该试剂盒提供了一种简单、高效的植物DNA提取方案。植物细胞经物理方法破碎后,裂解产 物中的DNA在高盐存在时结合于硅基包被的磁珠表面。漂洗后, DNA被洗脱于Buffer TB或去离子 水中。提取得率与样品类型以及细胞破碎效果有很大关系,提取得到的DNA可用于二代测序、 PCR检验等下游实验。
自备仪器、试剂
1. CWE2100或CWE9600
2. 96 DW Plate, 8 tip Com, Spin tips pack
3. 无水乙醇
实验前准备以及注意事项
1. 第一次实验前按照试剂瓶标签上的说明向Buffer GW1中加入指定用量的无水乙醇;
2. 客户需配置75%乙醇用于漂洗;
3. Magbeads PN严禁冰冻、高速离心。冰冻、高速离心可能会对Magbeads造成不可逆的损害。
操作步骤
手动操作
1. 植物材料的破碎:
方案1:
1)称取经液氮充分研磨好的新鲜植物样品粉末约50-100 mg或干燥样品粉末约30 mg,迅速转 移到预先装有400 µL Buffer PLS和5 µL RNase A(10 mg/mL)的离心管中,迅速颠倒混匀 后,瞬时离心,置于恒温混匀仪70℃, 1600 rpm ,10 min。(提取多糖多酚植物在Buffer PLS中加入β巯基乙醇,使其终浓度为5%,可提高核酸提取效果)
方案2:
1)向2.0 mL离心管中加入50 -100 mg新鲜植物材料或20 mg干燥植物材料;
2)用液氮速冻后用玻璃将植物材料充分研磨至粉状;
向离心管中加入400 μL Buffer PLS和5 µL RNaseA(10 mg/mL),迅速颠倒混匀后置于恒温 混匀仪70℃, 1600 rpm ,10 min。(提取多糖多酚植物在Buffer PLS中加入β巯基乙醇,使其 终浓度为5%,可提高核酸提取效果)
方案3:
1)向2.0 mL离心管中加入50 -100 mg新鲜植物材料或20 mg干燥植物材料;
2)向离心管中加入400 μL Buffer PLS、5 μL RNaseA (10 mg/mL)和1颗钢珠,之后立即将离 心管固定于组织破碎仪中震荡破碎;
3)将离心管从组织破碎仪中取出后,瞬时离心,置于恒温混匀仪70℃, 1600 rpm ,10 min。
2. 12,000 rpm (~13,400×g)离心4 min后,转移全部上清至新的1.5 mL离心管中。
3. 向1.5 mL离心管中加入550 μL BufferZB和20 µL Magbeads PN,颠倒混匀30 s,瞬时离心, 室温静置5 min,其间颠倒混匀数次。
4. 瞬时离心,将离心管转移至磁力架吸附1min(直至溶液澄清),之后弃去溶液,期间避免接 触磁珠。
5. 将离心管从磁力架上取下,加入650 µL Buffer GW1,涡旋混匀10 s,重悬磁珠,之后将离心管 固定于25℃、 1600 rpm的恒温混匀仪上震荡混匀2 min或涡旋震荡1 min。
6. 将离心管固定于磁力架上静置1 min,之后充分弃去溶液;
7. 重复步骤5-6;
8. 将离心管从磁力架上取下,加入650 µL 75%乙醇,涡旋混匀10 s,重悬磁珠,之后将离心管固 定于25℃、 1600 rpm的恒温混匀仪上震荡混匀2 min或涡旋震荡1 min。
9. 将离心管固定于磁力架上静置1 min,之后充分弃去溶液
10. 重复步骤8-9;
11. 将离心管短暂离心后用移液器再次去除管底溶液,之后室温放置5-10 min 使乙醇充分挥发; 12. 向离心管中加入100 μL Buffer TB,涡旋震荡时磁珠充分悬浮与洗脱液中后将其放于65℃、
1600 rpm的恒温混匀仪上震荡裂解10分钟,或在65℃水浴锅中孵育10 min,期间涡旋震荡4次。
13. 将离心管固定于磁力架上静置2 min,待磁珠充分吸附于离心管侧壁后将洗脱液转移至新的离
心管中-20℃保存备用。
与CWE2100匹配
1. 植物材料的破碎:
方案1:
1)称取经液氮充分研磨好的新鲜植物样品粉末约50-100mg或干燥样品粉末约30mg,迅速转 移到预先装有400 µL Buffer PLS和5 µL RNase A(10 mg/mL)的离心管中,迅速颠倒混匀后, 瞬时离心,置于恒温混匀仪70℃, 1600 rpm ,10 min。(提取多糖多酚植物在Buffer PLS中加入β巯基乙醇,使其终浓度为5%,可提高核酸提取效果)
方案2:
1) 向2.0 mL离心管中加入50 -100 mg新鲜植物材料或20 mg干燥植物材料;
2) 用液氮速冻后用玻璃将植物材料充分研磨至粉状;
3) 向离心管中加入400 μL Buffer PLS和5 µL RNaseA(10 mg/mL),迅速颠倒混匀后置于恒 温混匀仪70℃, 1600 rpm ,10 min。(提取多糖多酚植物在Buffer PLS中加入β巯基乙醇,使 其终浓度为5%,可提高核酸提取效果)
方案3:
1) 向2.0 mL离心管中加入50-100 mg新鲜植物材料或20 mg干燥植物材料;
2) 向离心管中加入400 μL Buffer PLS、5 μL RNase A (10 mg/mL)和1颗钢珠,之后立即将离 心管固定于组织破碎仪中震荡破碎;
3) 将离心管从组织破碎仪中取出后,瞬时离心,置于恒温混匀仪70℃, 1600rpm ,10 min。 2. 12,000 rpm (~13,400×g)离心4 min后,转移全部上清至96 DW深孔板中;
3. 按下表向96 DW深孔板中加入试剂:
| 位置 | 试剂及用量 | | 1&7Colume | Lysate: ALL Buffer ZB: 550 μL Magbeads PN: 20 μL | | 2&8Colume | Buffer GW1: 650 μL | | 3&9Colume | Buffer GW1: 650 μL | | 4&10Colume | 75%乙醇: 650 μL | | 5&11 Colume | 75%乙醇: 650 μL | | 6&12Colume | Buffer TB: 100 μL |
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4. 将96 DW深孔板以及磁棒套放于CWE2100仪器中,运行Cowin Plant程序。
5. 约50 min后程序运行结束,取出深孔板与磁套。将6&12列中的裂解产物转移至1.5 mL离心管 中-20℃保存备用。
与CWE9600匹配
1. 方案1:
1) 称取经液氮充分研磨好的新鲜植物样品粉末约50-100 mg或干燥样品粉末约30 mg,迅速转 移到预先装有400 µL Buffer PLS和5 µL RNase A(10 mg/mL)的离心管中,迅速颠倒混匀 后,瞬时离心,置于恒温混匀仪70℃, 1600 rpm,10 min。(提取多糖多酚植物在Buffer PLS 中加入5% β巯基乙醇,可提高核酸提取效果)
方案2:
1) 向2.0 mL离心管中加入50-100 mg新鲜植物材料或20 mg干燥植物材料;
2) 用液氮速冻后用玻璃将植物材料充分研磨至粉状;
3) 向离心管中加入400 μL Buffer PLS和5 µL RNase A(10 mg/mL),迅速颠倒混匀后置于恒 温混匀仪70℃, 1600rpm,10 min。(提取多糖多酚植物在Buffer PLS中加入5% β巯基乙醇, 可 提高核酸提取效果)
方案3:
1) 向2.0 mL离心管中加入50-100 mg新鲜植物材料或20 mg干燥植物材料;
2) 向离心管中加入400 μL Buffer PLS、5 μL RNase A (10 mg/mL)和1颗钢珠,之后立即将离 心管固定于组织破碎仪中震荡破碎;
3) 将离心管从组织破碎仪中取出后,瞬时离心,置于恒温混匀仪70℃, 1600 rpm ,10 min。
2. 12,000 rpm (~13,400×g)离心4 min后,转移全部上清至96 DW深孔板中;
3. 按下表向96 DW深孔板中加入试剂:
| 位置 | 试剂及用量 | | Plate 1 | Lysate: ALL Buffer ZB: 550 μL Magbeads PN: 20 μL | | Plate 2 | Buffer GW1: 650 μL | | Plate 3 | Buffer GW1: 650 μL | | Plate 4 | 75%乙醇: 650 μL | | Plate 5 | 75%乙醇: 650 μL | | Plate 6 | Buffer TB: 100 μL |
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4. 将96 DW深孔板以及磁棒套放于CWE9600仪器中,运行程序。
5. 约50 min后程序运行结束,取出深孔板与磁套。将Plate 6中的裂解产物转移至1.5 mL离心管 中-20℃保存备用。
| M669913 | Component | 96 T | Storage | | M669913A | Buffer PLS | 50 mL | RT | | M669913B | Buffer ZB | 55 mL | RT | | M669913C | Buffer GW1 (concentrate) | 80 mL | RT | | M669913D | Buffer TB | 10 mL | RT | | M669913E | RNase A (10 mg/mL) | 0.6 mL | RT | | M669913F | Magbeads PN | 2×1 mL | RT |
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Product Introduction
This kit provides a simple and efficient plant DNA extraction solution. After plant cells are physically broken, the DNA in the lysis product binds to the surface of silica coated magnetic beads in the presence of high salt. After rinsing, DNA is eluted in Buffer TB or deionized water. The extraction yield is closely related to the sample type and cell fragmentation effect, and the extracted DNA can be used for downstream experiments such as second-generation sequencing and PCR testing.
Self provided instruments and reagents
1. CWE2100 or CWE9600
2. 96 DW Plate, 8 tip Com, Spin tips pack
3. Anhydrous ethanol
Preparation and precautions before the experiment
1. Before the first experiment, add the specified amount of anhydrous ethanol to Buffer GW1 according to the instructions on the reagent bottle label;
2. The customer needs to configure 75% ethanol for rinsing;
3. Magheads PN strictly prohibits freezing and high-speed centrifugation. Freezing and high-speed centrifugation may cause irreversible damage to Magheads.
Operation steps
Manual operation
1. Crushing of plant materials:
Option 1:
1) Weigh about 50-100 mg of fresh plant sample powder or about 30 mg of dry sample powder thoroughly ground with liquid nitrogen, transfer quickly to a centrifuge tube pre filled with 400 µ L Buffer PLS and 5 µ L RNase A (10 mg/mL), quickly invert and mix, centrifuge instantly, and place in a constant temperature mixer at 70 ℃, 1600 rpm, for 10 minutes. Extract polysaccharides and polyphenols from plants and add them to Buffer PLS β Mercaptoethanol, with a final concentration of 5%, can improve the efficiency of nucleic acid extraction
Option 2:
1) Add 50-100 mg of fresh plant material or 20 mg of dried plant material to a 2.0 mL centrifuge tube; 2) Quickly freeze the plant material with liquid nitrogen and grind it thoroughly to powder using glass;
Add 400 to the centrifuge tube μ L Buffer PLS and 5 µ L RNaseA (10 mg/mL) were quickly mixed upside down and placed in a constant temperature mixer at 70 ℃, 1600 rpm, for 10 minutes. Extract polysaccharides and polyphenols from plants and add them to Buffer PLS β Mercaptoethanol, with a final concentration of 5%, can improve the efficiency of nucleic acid extraction
Option 3:
1) Add 50-100 mg of fresh plant material or 20 mg of dried plant material to a 2.0 mL centrifuge tube;
2) Add 400 to the centrifuge tube μ L Buffer PLS, 5 μ L RNaseA (10 mg/mL) and 1 steel ball, then immediately fix the centrifuge tube in the tissue crusher and shake it to break;
3) After removing the centrifuge tube from the tissue crusher, centrifuge it instantaneously and place it in a constant temperature mixer at 70 ℃, 1600 rpm, for 10 minutes. After centrifugation at 12000 rpm (~13400 × g) for 4 minutes, transfer all supernatant to a new 1.5 mL centrifuge tube.
3. Add 550 to a 1.5 mL centrifuge tube μ Mix L BufferZB and 20 µ L Magheads PN upside down for 30 seconds, centrifuge instantaneously, let stand at room temperature for 5 minutes, and mix upside down several times.
4. Instantaneous centrifugation, transfer the centrifuge tube to a magnetic rack for adsorption for 1 minute (until the solution clears), then discard the solution and avoid contact with the magnetic beads during this period.
5. Remove the centrifuge tube from the magnetic frame, add 650 µ L Buffer GW1, vortex mix for 10 seconds, resuspend the magnetic beads, and then fix the centrifuge tube on a constant temperature mixer at 25 ℃ and 1600 rpm, shake and mix for 2 minutes or vortex shake for 1 minute.
6. Fix the centrifuge tube on a magnetic frame and let it stand for 1 minute, then discard the solution thoroughly;
7. Repeat steps 5-6;
8. Remove the centrifuge tube from the magnetic frame, add 650 µ L of 75% ethanol, vortex mix for 10 seconds, resuspend the magnetic beads, and then fix the centrifuge tube on a constant temperature mixer at 25 ℃ and 1600 rpm, shake and mix for 2 minutes or vortex shake for 1 minute.
9. Fix the centrifuge tube on a magnetic rack and let it stand for 1 minute, then discard the solution thoroughly
10. Repeat steps 8-9;
11. After briefly centrifuging the centrifuge tube, use a pipette to remove the bottom solution again, and then leave it at room temperature for 5-10 minutes to allow the ethanol to fully evaporate;
12. Add 100 to the centrifuge tube μ L Buffer TB, during vortex oscillation, the magnetic beads are fully suspended in the eluent and placed at 65 ℃ Shake and crack on a constant temperature mixer at 1600 rpm for 10 minutes, or incubate in a 65 ℃ water bath for 10 minutes, with 4 vortex oscillations during this period.
13. Fix the centrifuge tube on the magnetic frame and let it stand for 2 minutes. After the magnetic beads are fully adsorbed on the side wall of the centrifuge tube, transfer the eluent to a new centrifuge tube and store it at -20 ℃ for later use.
Matched with CWE2100
1. Crushing of plant materials:
Option 1:
1) Weigh about 50-100mg of fresh plant sample powder or about 30mg of dry sample powder that has been fully ground with liquid nitrogen, and quickly transfer them to a centrifuge tube pre filled with 400 µ L Buffer PLS and 5 µ L RNase A (10 mg/mL). Quickly invert the mixture and centrifuge it instantaneously. Place it in a constant temperature mixer at 70 ℃, 1600 rpm, and 10 minutes. Extract polysaccharides and polyphenols from plants and add them to Buffer PLS β Mercaptoethanol, with a final concentration of 5%, can improve the efficiency of nucleic acid extraction
Option 2:
1) Add 50-100 mg of fresh plant material or 20 mg of dried plant material to a 2.0 mL centrifuge tube;
2) Quickly freeze the plant material with liquid nitrogen and grind it thoroughly to powder using glass;
3) Add 400 to the centrifuge tube μ L Buffer PLS and 5 µ L RNaseA (10 mg/mL) were quickly mixed upside down and placed in a constant temperature mixer at 70 ℃, 1600 rpm, for 10 minutes. Extract polysaccharides and polyphenols from plants and add them to Buffer PLS β Mercaptoethanol, with a final concentration of 5%, can improve the efficiency of nucleic acid extraction
Option 3:
1) Add 50-100 mg of fresh plant material or 20 mg of dried plant material to a 2.0 mL centrifuge tube;
2) Add 400 to the centrifuge tube μ L Buffer PLS, 5 μ L RNase A (10 mg/mL) and 1 steel ball, then immediately fix the centrifuge tube in a tissue crusher and shake to break it;
3) After removing the centrifuge tube from the tissue crusher, centrifuge it instantaneously and place it in a constant temperature mixer at 70 ℃, 1600rpm, for 10 minutes. 2. After centrifugation at 12000 rpm (~13400 × g) for 4 minutes, transfer all supernatant to a 96 DW deep well plate;
3. Add reagents to the 96 DW deep well plate according to the following table:
position
| Reagent and dosage
| | 1&7Colume | Lysate: ALL Buffer ZB: 550 μL Magbeads PN: 20 μL | | 2&8Colume | Buffer GW1: 650 μL | | 3&9Colume | Buffer GW1: 650 μL | | 4&10Colume | 75%ethanol: 650 μL | | 5&11 Colume | 75%ethanol: 650 μL | | 6&12Colume | Buffer TB: 100 μL |
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4. Place the 96 DW deep hole plate and magnetic rod sleeve in the CWE2100 instrument and run the Cowin Plant program.
5. After about 50 minutes, the program ends and the deep hole plate and magnetic sleeve are removed. Transfer the cracking products from columns 6&12 to a 1.5 mL centrifuge tube and store at -20 ℃ for future use.
Matched with CWE9600
Option 1:
1) Weigh about 50-100 mg of fresh plant sample powder or about 30 mg of dry sample powder thoroughly ground with liquid nitrogen, transfer quickly to a centrifuge tube pre filled with 400 µ L Buffer PLS and 5 µ L RNase A (10 mg/mL), quickly invert and mix, centrifuge instantly, and place in a constant temperature mixer at 70 ℃, 1600 rpm, for 10 minutes. Extract polysaccharides and polyphenols from plants and add 5% to Buffer PLS β Mercaptoethanol can improve the efficiency of nucleic acid extraction
Option 2:
1) Add 50-100 mg of fresh plant material or 20 mg of dried plant material to a 2.0 mL centrifuge tube;
2) Quickly freeze the plant material with liquid nitrogen and grind it thoroughly to powder using glass;
3) Add 400 to the centrifuge tube μ L Buffer PLS and 5 µ L RNase A (10 mg/mL) were quickly mixed upside down and placed in a constant temperature mixer at 70 ℃, 1600rpm, for 10 minutes. Extract polysaccharides and polyphenols from plants and add 5% to Buffer PLS β Mercaptoethanol can improve the efficiency of nucleic acid extraction
Option 3:
1) Add 50-100 mg of fresh plant material or 20 mg of dried plant material to a 2.0 mL centrifuge tube;
2) Add 400 to the centrifuge tube μ L Buffer PLS, 5 μ L RNase A (10 mg/mL) and 1 steel ball, then immediately fix the centrifuge tube in a tissue crusher and shake to break it;
3) After removing the centrifuge tube from the tissue crusher, centrifuge it instantaneously and place it in a constant temperature mixer at 70 ℃, 1600 rpm, for 10 minutes.
2. After centrifugation at 12000 rpm (~13400 × g) for 4 minutes, transfer all supernatant to a 96 DW deep well plate;
3. Add reagents to the 96 DW deep well plate according to the following table:
position
| Reagent and dosage
| | Plate 1 | Lysate: ALL Buffer ZB: 550 μL Magbeads PN: 20 μL | | Plate 2 | Buffer GW1: 650 μL | | Plate 3 | Buffer GW1: 650 μL | | Plate 4 | 75% ethanol : 650 μL | | Plate 5 | 75% ethanol : 650 μL | | Plate 6 | Buffer TB: 100 μL |
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4. Place the 96 DW deep hole plate and magnetic rod sleeve in the CWE9600 instrument and run the program.
5. After about 50 minutes, the program ends and the deep hole plate and magnetic sleeve are removed. Transfer the cracking products from Plate 6 to a 1.5 mL centrifuge tube and store at -20 ℃ for later use.